Commits · master · Dorothee Childs / TPP-data-analysis

20 Aug, 2019 1 commit
- Fix file path, clean up comments · 6eede5c9
  Dorothee Childs authored Aug 20, 2019
  
  6eede5c9
14 Aug, 2019 3 commits
- Adapt file names of supplementary Figures S6,S7 · 3d25ab83
  Dorothee Childs authored Aug 15, 2019
  
  3d25ab83
- Revise color code in supplementary Figures S6, S7 · 6b8ab90f
  Dorothee Childs authored Aug 15, 2019
  
  6b8ab90f
- Rerun code to generate paper figures · de0ec567
  Dorothee Childs authored Aug 15, 2019
  
  de0ec567
01 Apr, 2019 3 commits
- Merge branch 'master' of https://git.embl.de/childs/TPP-data-analysis · 483ececc
  Dorothee Childs authored Apr 01, 2019
  
  483ececc
- Small edits 2019-03-31 · eaedf4f7
  Dorothee Childs authored Apr 01, 2019
  
  eaedf4f7
- Small edits from 2019/03/19 · 3ca1a67f
  Dorothee Childs authored Mar 19, 2019
  
  3ca1a67f
19 Mar, 2019 2 commits
- Fig. S2: make axis labels more explicit · 3d4f4961
  Dorothee Childs authored Mar 19, 2019
  
  3d4f4961
- Remove code for exploratory volcano plot. · 7a96f448
  Dorothee Childs authored Mar 19, 2019
  
  7a96f448
05 Mar, 2019 1 commit
- Create volcano plot for panobinostat and mark significant hits. · d36127e7
  Dorothee Childs authored Mar 05, 2019
  
  d36127e7
26 Feb, 2019 6 commits
- Small updates to workflow file and resulting figures · 68ddda76
  Dorothee Childs authored Feb 26, 2019
  
  68ddda76
- Revise Figures · 39bde5b9
  Dorothee Childs authored Feb 26, 2019
  
  39bde5b9
- Change S-Table · 3ba3f3b1
  Dorothee Childs authored Feb 26, 2019
  
  3ba3f3b1
- Add Supplementary Figure PDFs · 73d9605e
  Dorothee Childs authored Feb 26, 2019
  
  73d9605e
- Add original scripts to reproduce Figures and Supplementary Figures. · feaefe11
  Dorothee Childs authored Feb 26, 2019
  
  feaefe11
- Small updates to Figures · bd34b21f
  Dorothee Childs authored Feb 26, 2019
  
  bd34b21f
14 Sep, 2018 5 commits
- Commit updated report as PDF and associated results tables · 40f1c8f6
  Dorothee Childs authored Sep 14, 2018
  
  40f1c8f6
- Add data for figure and table creation · 4987ad96
  Dorothee Childs authored Sep 14, 2018
  
  4987ad96
- Add script to invoke optimization by optim instead of nls · e06bc781
  Dorothee Childs authored Sep 14, 2018
  
  e06bc781
- Cosmetic changes · ca7fe32f
  Dorothee Childs authored Sep 14, 2018
  
  ca7fe32f
- Add manuscript figures · 34c2a956
  Dorothee Childs authored Sep 14, 2018
  
  34c2a956
28 Aug, 2018 1 commit
- Add Code for Suppl Table 1 · 3b254a8b
  Dorothee Childs authored Aug 28, 2018
  
  3b254a8b
23 Aug, 2018 3 commits
- Update Fig. 5 · 41b71f39
  Dorothee Childs authored Aug 23, 2018
  
  41b71f39
- Add ROC curves · 8c8018b2
  Dorothee Childs authored Aug 23, 2018
  
  8c8018b2
- Add code for Fig. 4 · e5549f15
  Dorothee Childs authored Aug 23, 2018
  
  e5549f15
22 Aug, 2018 6 commits
- Add Code for Fig. S2 · 083fd5eb
  Dorothee Childs authored Aug 23, 2018
  
  083fd5eb
- Create separate file for the figure plots and tables · 339bed2a
  Dorothee Childs authored Aug 22, 2018
  
  339bed2a
- Add Fig. 1E · 3dbf01d3
  Dorothee Childs authored Aug 22, 2018
  
  3dbf01d3
- Update Fig. 2(C): increase point size · 49ef3bf3
  Dorothee Childs authored Aug 22, 2018
  
  49ef3bf3
- Update Fig. 2(C) · 25eb2881
  Dorothee Childs authored Aug 22, 2018
  
  25eb2881
- Create subdirs · fccaf760
  Dorothee Childs authored Aug 22, 2018
```
Include code for Fig. 2 (C)
```
  fccaf760
21 Aug, 2018 1 commit
- Repat model fitting for cases where rss difference is negative due to suboptimal local minima · a7e252df
  Dorothee Childs authored Aug 21, 2018
  
  a7e252df
20 Aug, 2018 2 commits
- Merge branch 'master' of git.embl.de:childs/TPP-data-analysis · 8c88a8e6
  Dorothee Childs authored Aug 21, 2018
  
  8c88a8e6
- Define function for RSS-difference computation and use per protein. · ce99fd64
  Dorothee Childs authored Aug 21, 2018
  
  ce99fd64
19 Aug, 2018 1 commit
- Update README.md · 2978e779
  Dorothee Childs authored Aug 19, 2018
  
  2978e779
16 Aug, 2018 1 commit
- Improve documentation of vignette and data columns. · f3f3ac74
  Dorothee Childs authored Aug 16, 2018
  
  f3f3ac74
15 Aug, 2018 1 commit
- Revise code for model fitting and RSS computation. · b986bff1
  Dorothee Childs authored Aug 15, 2018
  
  b986bff1
14 Aug, 2018 2 commits
- Cosmetic changes · 68fbf5d7
  Dorothee Childs authored Aug 14, 2018
  
  68fbf5d7
- Finish first complete draft. · a3551b81
  Dorothee Childs authored Aug 14, 2018
  
  a3551b81
13 Aug, 2018 1 commit
- Edit model fitting code and check that it reproduces paper results · bd1f20ad
  Dorothee Childs authored Aug 13, 2018
  
  bd1f20ad