Dear metaSNV developer,
I'm writing regarding the conda installation. In particular, there are a bunch of inconsistent libraries with mOTUs.
As a result, if you do:
conda install -c bioconda motus
it will install mOTUs 2.1.1 (instead of 2.6.0) or give a bunch of problem with inconsistent libraries.
Since mOTUs require only
samtools, I think that this problem would not be related only to mOTUs.
@rossum @ext.paolil , do you know if metaSNV works with python 3.7? We would add this requirement in the conda yaml: https://github.com/bioconda/bioconda-recipes/blob/master/recipes/metasnv/meta.yaml
Talking to Renato, the library
zlib would also be problematic.