From 121316719e347ae7c63acaf7c131ebb87dc8dcf3 Mon Sep 17 00:00:00 2001
From: Nicolas Descostes <nicolas.descostes@embl.it>
Date: Wed, 4 Oct 2023 15:30:26 +0200
Subject: [PATCH] change url
---
.../chipseq/spikchipcustom/Singularity.spikchipcustom-v099 | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/recipes/chipseq/spikchipcustom/Singularity.spikchipcustom-v099 b/recipes/chipseq/spikchipcustom/Singularity.spikchipcustom-v099
index 7a211e7..605bd31 100644
--- a/recipes/chipseq/spikchipcustom/Singularity.spikchipcustom-v099
+++ b/recipes/chipseq/spikchipcustom/Singularity.spikchipcustom-v099
@@ -30,10 +30,10 @@ From: ubuntu
R --slave -e 'install.packages(c("BiocManager", "MASS"), repos="https://cloud.r-project.org/")' && R --slave -e 'BiocManager::install(c("affy"))'
# ~~~~~ spikchip ~~~~~ #
- curl -L https://github.com/descostesn/spikChIP/archive/overwrite.tar.gz -o spikchip.tar.gz && tar -xvzf spikchip.tar.gz && rm spikchip.tar.gz && cd spikChIP-overwrite/ && rm -r examples && cd ..
+ curl -L https://github.com/descostesn/spikChIP/archive/refs/tags/0.0.99.tar.gz -o spikchip.tar.gz && tar -xvzf spikchip.tar.gz && rm spikchip.tar.gz && cd spikChIP-0.0.99/ && rm -r examples && cd ..
%environment
- export PATH="${PATH}:/spikChIP-overwrite:/seqcode-main/bin"
+ export PATH="${PATH}:/spikChIP-0.0.99:/seqcode-main/bin"
export LC_ALL=C
export LC_CTYPE=C
export LC_COLLATE=C
--
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