From 933987e9d51e68b75d7177c2745018c1959d25d3 Mon Sep 17 00:00:00 2001
From: descoste <descoste@pc-bioinf01.embl.de>
Date: Thu, 21 Apr 2022 15:05:16 +0200
Subject: [PATCH] deploy hiddendomains
---
.gitlab-ci.yml | 36 +++++--------------
.../peakcallers/hiddendomains-deploy.yaml | 9 +++++
.../peakcallers/hiddendomains-test.backup | 6 ++++
3 files changed, 23 insertions(+), 28 deletions(-)
create mode 100644 yaml-files/peakcallers/hiddendomains-deploy.yaml
create mode 100644 yaml-files/peakcallers/hiddendomains-test.backup
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index adcb084..d13b256 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -36,34 +36,6 @@ image:
## WRITE YOUR TEST RULE HERE AFTER BRANCHING ON SUBMISSION AND CREATE A MERGE REQUEST
-hiddendomains-31-test:
- extends: .templateTest
- variables:
- BASENAME: hiddendomains
- TAG: 31
- RECIPE_PATH: recipes/peakcallers/hiddendomains
-
-macs2-2271-test:
- extends: .templateTest
- variables:
- BASENAME: macs2
- TAG: 2271
- RECIPE_PATH: recipes/peakcallers/macs2
-
-
-picardtools-2221-test:
- extends: .templateTest
- variables:
- BASENAME: picardtools
- TAG: 2221
- RECIPE_PATH: recipes/analysis-suites/picardtools
-
-picardtools-2271-test:
- extends: .templateTest
- variables:
- BASENAME: picardtools
- TAG: 2271
- RECIPE_PATH: recipes/analysis-suites/picardtools
#####################
@@ -95,3 +67,11 @@ include:
include:
- local: "yaml-files/analysis-suites/deeptools-deploy.yaml"
+
+
+#####################
+# Peaks callers
+#####################
+
+include:
+ - local: "yaml-files/peakcallers/hiddendomains-deploy.yaml"
diff --git a/yaml-files/peakcallers/hiddendomains-deploy.yaml b/yaml-files/peakcallers/hiddendomains-deploy.yaml
new file mode 100644
index 0000000..94aef5a
--- /dev/null
+++ b/yaml-files/peakcallers/hiddendomains-deploy.yaml
@@ -0,0 +1,9 @@
+hiddendomains-31-builddeploy:
+ extends: .templateBuildDeploy
+ variables:
+ BASENAME: hiddendomains
+ TAG: 31
+ RECIPE_PATH: recipes/peakcallers/hiddendomains
+ only:
+ changes:
+ - recipes/peakcallers/hiddendomains/Singularity.hiddendomains-31
diff --git a/yaml-files/peakcallers/hiddendomains-test.backup b/yaml-files/peakcallers/hiddendomains-test.backup
new file mode 100644
index 0000000..959888a
--- /dev/null
+++ b/yaml-files/peakcallers/hiddendomains-test.backup
@@ -0,0 +1,6 @@
+hiddendomains-31-test:
+ extends: .templateTest
+ variables:
+ BASENAME: hiddendomains
+ TAG: 31
+ RECIPE_PATH: recipes/peakcallers/hiddendomains
--
GitLab