diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 88585d20280ec493b45091fc06a48e3161fae807..71570d7ff367f01b87893798693b8afaa009c406 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -36,6 +36,21 @@ image:
 
 ## WRITE YOUR TEST RULE HERE AFTER BRANCHING ON SUBMISSION AND CREATE A MERGE REQUEST
 
+bowtie2-241cv1-test:
+  extends: .templateTest
+  variables:
+    BASENAME: bowtie2
+    TAG: 241cv1
+    RECIPE_PATH: recipes/quality-control/bowtie2
+
+bowtie2-245-test:
+  extends: .templateTest
+  variables:
+    BASENAME: bowtie2
+    TAG: 245
+    RECIPE_PATH: recipes/quality-control/bowtie2
+
+
 #####################
 # Image analysis
 #####################