Commit 82e050fd authored by Christer Ejsing's avatar Christer Ejsing
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README

parent 3ab3d7da
......@@ -21,8 +21,11 @@ ALEX123 (Analysis of Lipid EXperiments, for processing FTMS, MS2 and MS3 data) i
+ Install SAS 9.2 with SAS Enterprise Guide 5.1 (or later versions) to use scripts for automated high confidence lipid identification (file extension .epg) (https://www.sas.com/en_us/software/enterprise-guide.html).
+ Install Tableau Desktop (version 10.2 or later) to use and modify data visualization templates (file extensions .twb) (http://www.tableausoftware.com/products/desktop).
## References
+ Ellis SR, Paine MRL, Eijkel GB, Pauling JK, Husen P, Jervelund M, Hermansson M, Ejsing CS, Heeren RMA. Automated, Parallel Mass Spectrometry Imaging and Structural Identification of Lipids (2018, under review).
+ Pauling JK, Hermansson M, Hartler J, Christiansen K, Gallego SF, Peng B, Ahrends R, Ejsing CS. Proposal for a common nomenclature for fragment ions in mass spectra of lipids. PLoS One. 2017 12(11):e0188394.
+ Husen P, Tarasov K, Katafiasz M, Sokol E, Vogt J, Baumgart J, Nitsch R, Ekroos K, Ejsing CS. Analysis of lipid experiments (ALEX): a software framework for analysis of high-resolution shotgun lipidomics data. PLoS One. 2013 8(11):e79736.
[test](https://doi.org/10.1371/journal.pone.0079736)
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