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This repository includes the exact commands/instructions in order to set up and run the integrative modelling of ScNPC adapted from Allegretti et al. (2020).

Laura Bianchi - Ruprecht lab (CRG)

Gopi Shah - MIF

Nicola Gritti - MIF

Keywords: Luxendo, MuVi SPIM, python, cellpose, apoptosis, segmentation, tracking, support, external, bioimage analysis, zebrafish

EMBL Python User Group

EMBL Python User Group

Cython bindings and Python interface to HMMER3.

Cython bindings and Python interface to trimAl, a tool for automated alignment trimming.

Python interface to Prodigal, an ORF finder for genomes, progenomes and metagenomes.

Centre for Bioimage Analysis

A NumPy port of the foldseek code for encoding protein structures to 3di.

Rendered at: https://grp-bio-it.embl-community.io/template-jupyter-book

A Python client for the high-level DMA API.