GitLab

Source code related to the publication "Visualization of loop extrusion by DNA nanoscale tracing in single human cells" by Beckwith, Ødegård-Fougner et.al. DOI:

Synchronises the content of a directory on the server with a galaxy library's folder. The server dir sub-structure is preserved and all files linked using symbolic links. The script can be started in daemon mode or placed under cron monitoring.

Python interface to Prodigal, an ORF finder for genomes, progenomes and metagenomes.

Cython bindings and Python interface to HMMER3.

FCS-based calibrated imaging analysis software

This project aims to offer a platform for sharing ideas, resources, tools & techniques, interesting publications, interviews and stories from all our community members. https://grp-bio-it.embl-community.io/blog/

EMBL Python User Group

GRN pipeline

Introduction to using Cytoscape and basics of Network Biology

Gene Cluster prediction with Conditional random fields

An R package to deal with data from single molecule localization microscopy..