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Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.

Cython bindings and Python interface to trimAl, a tool for automated alignment trimming.

Python interface to Prodigal, an ORF finder for genomes, progenomes and metagenomes.

A PyTorch implementation of Tree-structured Conditional Random Fields.

Physicochemical properties and indices for amino-acid sequences (ported from R).

PyO3 bindings and Python interface to skani, a method for fast fast genomic identity calculation using sparse chaining.

EMBL Python User Group fork

A Python client for the high-level DMA API.

GUI and functions for controlling the tracebot and automating microscopes.

Cuylen Lab