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Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.

EMBL Python User Group

This repository includes the exact commands/instructions in order to set up and run the integrative modelling of ScNPC adapted from Allegretti et al. (2020).

Python interface to Prodigal, an ORF finder for genomes, progenomes and metagenomes.

Cython bindings and Python interface to HMMER3.

In this project, we investigated drug impact on gut bacteria by analyzing a large untergeted metabolomics data set and integrating drug-protein interaction networks from STITCH.

Using QEMU to build Singularity containers

Small bash script to sort Luxendo's SPIM data in one single folder