Update README.md

README.md

@@ -11,11 +11,11 @@ Automated Feedback Procedures for the Fly Embryo Screen.
 - Fiji
 - AutoMicTools library
 
-See [Documentation](./Documentation/manual.md) for the guidelines
+See [Documentation](./docs/manual.md) for the guidelines
 
 # Documentation
 
-Under this [link](./Documentation/manual.md) you will find the detailed description of the tool functions and step-by-step guidelines for the feedback microscopy pipeline.
+Under this [link](./docs/manual.md) you will find the detailed description of the tool functions and step-by-step guidelines for the feedback microscopy pipeline.
 
 # Citation