adding PathUtils

src/main/java/feedback/fly/embryo/utils/PathUtils.java

+package feedback.fly.embryo.utils;
+
+import java.io.File;
+
+public abstract class PathUtils {
+	public final String extractExperimentName(File _imageFile, String _endSequence) {
+		String Exper_nm=_imageFile.getName();
+		Exper_nm=Exper_nm.substring(0, Exper_nm.indexOf(_endSequence));
+		return Exper_nm;
+	}
+}

src/test/java/algorithm/tests/FindEmbryoOrientationTischi.java

@@ -7,7 +7,6 @@ import java.io.File;
 import de.embl.cba.flyreg.FlyEmbryoRegistrationSettings;
 import de.embl.cba.flyreg.FlyEmbryoSingleChannelRegistration;
 
-import de.embl.cba.morphometry.Utils;
 import ij.ImagePlus;
 import loci.plugins.BF;
 import net.imagej.ImageJ;
@@ -35,7 +34,6 @@ public class FindEmbryoOrientationTischi {
 
 		final FlyEmbryoSingleChannelRegistration registration = new FlyEmbryoSingleChannelRegistration( settings, opService );
 
-		final double[] calibration = Utils.getCalibration( imagePlus );
 
 		registration.run(imagePlus, 0);
 		

src/test/java/jobdistributors/run/debug/RunJobDistributor.java

 package jobdistributors.run.debug;
 
-import feedback.fly.embryo.jobdistributors.JobDistributor_AutoSelectionMultiple_AFocus_Rotation_Split;
-//import feedback.fly.embryo.jobdistributors.JobDistributor_ManualSelection3DMultiple_AFocus_Rotation_Split;
+//import feedback.fly.embryo.jobdistributors.JobDistributor_AutoSelectionMultiple_AFocus_Rotation_Split;
+import feedback.fly.embryo.jobdistributors.JobDistributor_ManualSelection3DMultiple_AFocus_Rotation_Split;
 import ij.IJ;
 import net.imagej.ImageJ;
 
 public class RunJobDistributor {
 	public static void main(String[] args) {
-		//Class<?> clazz = JobDistributor_ManualSelection3DMultiple_AFocus_Rotation_Split.class;
-		Class<?> clazz = JobDistributor_AutoSelectionMultiple_AFocus_Rotation_Split.class;
+		Class<?> clazz = JobDistributor_ManualSelection3DMultiple_AFocus_Rotation_Split.class;
+		//Class<?> clazz = JobDistributor_AutoSelectionMultiple_AFocus_Rotation_Split.class;
 
 		// start ImageJ
 		ImageJ ij2=new ImageJ();