Commits · 21a2819a1e4a34d701cf3505d0edb17a380c4d6b · ALMF / Genetic Interactions Screen on Lipid Levels

06 Jan, 2022 3 commits
- merge · 21a2819a
  Aliaksandr Halavatyi authored Jan 06, 2022
  
  21a2819a
- minor · e938bac1
  Aliaksandr Halavatyi authored Jan 06, 2022
  
  e938bac1
- working on the script for secondary screen formatting · e443e231
  Aliaksandr Halavatyi authored Jan 06, 2022
  
  e443e231
20 Sep, 2021 1 commit
- script for preparing primary screen for IDR · 7231e89c
  Aliaksandr Halavatyi authored Sep 20, 2021
  
  7231e89c
11 Aug, 2021 1 commit
- add summary plot for interaction values and Zscores · e0d23961
  Aliaksandr Halavatyi authored Aug 11, 2021
  
  e0d23961
05 Aug, 2021 1 commit
- Merge branch 'ext-yunfeng.huang-master-patch-15596' into 'master' · c257c4f6
  Aliaksandr Halavatyi authored Aug 05, 2021
```
Update README.md

See merge request !5
```
  c257c4f6
29 Jun, 2021 1 commit
- Update README.md · aae98bfb
  Yunfeng Huang authored Jun 29, 2021
  
  aae98bfb
25 Jun, 2021 5 commits
- links to the rscripts from the readme · da3068be
  Aliaksandr Halavatyi authored Jun 25, 2021
  
  da3068be
- Update of the main readme · 530ef192
  Aliaksandr Halavatyi authored Jun 25, 2021
  
  530ef192
- updating readme for CoRNAi · f685fb14
  Aliaksandr Halavatyi authored Jun 25, 2021
  
  f685fb14
- update readme for CoRNAi data · 06bfef8d
  Aliaksandr Halavatyi authored Jun 25, 2021
  
  06bfef8d
- updating gitignore to exclude output plots from the repo · 7c26496a
  Aliaksandr Halavatyi authored Jun 25, 2021
  
  7c26496a
24 Jun, 2021 4 commits
- adding README for CoRNAi · d0bfa5a5
  Aliaksandr Halavatyi authored Jun 24, 2021
  
  d0bfa5a5
- renaming coRNAi plots scripts · 43963256
  Aliaksandr Halavatyi authored Jun 24, 2021
  
  43963256
- cleaning script for boxblots · 071b493e
  Aliaksandr Halavatyi authored Jun 24, 2021
  
  071b493e
- removing unused packages · d33de4a8
  Aliaksandr Halavatyi authored Jun 24, 2021
  
  d33de4a8
23 Jun, 2021 4 commits
- cleaning primary screen analysis script - obsolete plots and tables · 95f5011c
  Aliaksandr Halavatyi authored Jun 23, 2021
  
  95f5011c
- renaming scripts for RNAi analysis · 861d0897
  Aliaksandr Halavatyi authored Jun 23, 2021
  
  861d0897
- delete changelog · b739a1c8
  Aliaksandr Halavatyi authored Jun 23, 2021
  
  b739a1c8
- Merge branch 'ext-yunfeng.huang-master-patch-95019' into 'master' · 88d00902
  Aliaksandr Halavatyi authored Jun 23, 2021
```
Upload New File - README for UKBB analysis scripts

See merge request !4
```
  88d00902
22 Jun, 2021 3 commits
- Add new file - LICENSE · b5ccaf81
  Yunfeng Huang authored Jun 22, 2021
  
  b5ccaf81
- Update README · c16f4ac0
  Yunfeng Huang authored Jun 22, 2021
  
  c16f4ac0
- Upload New File - README for UKBB analysis scripts · 3a423db5
  Yunfeng Huang authored Jun 22, 2021
  
  3a423db5
13 Jun, 2021 1 commit
- Merge branch 'ext-yunfeng.huang-master-patch-95019' into 'master' · 6fff6503
  Aliaksandr Halavatyi authored Jun 13, 2021
```
Upload R scripts for the UKBB analysis

See merge request !2
```
  6fff6503
10 Jun, 2021 10 commits
- Upload New File - Stratified analysis for LPL PTV-burden on gain-of-function variant S447Ter · d3c91700
  Yunfeng Huang authored Jun 10, 2021
  
  d3c91700
- Upload New File - R code for interaction analysis on PTV-burden with PRS for lipids in the UKBB · 72cb0b4f
  Yunfeng Huang authored Jun 10, 2021
  
  72cb0b4f
- Upload New File - R code for pairwise gene-gene interaction analysis on... · 7a7d22c6
  Yunfeng Huang authored Jun 10, 2021
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Upload New File - R code for pairwise gene-gene interaction analysis on PTV-burden with lead GWAS SNP for lipids in the UKBB
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  7a7d22c6
- Upload New File - R code for pairwise gene-gene interaction analysis on lead... · 55bb4920
  Yunfeng Huang authored Jun 10, 2021
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Upload New File - R code for pairwise gene-gene interaction analysis on lead GWAS SNP for lipids and CAD in the UKBB
```
  55bb4920
- Upload New File - R code for pairwise gene-gene interaction analysis on... · 3ca7d842
  Yunfeng Huang authored Jun 10, 2021
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Upload New File - R code for pairwise gene-gene interaction analysis on PTV-burden for lipids in the UKBB
```
  3ca7d842
- Upload New File - R code for single gene PTV-burden association analysis with lipids in the UKBB · e9515736
  Yunfeng Huang authored Jun 10, 2021
  
  e9515736
- robustZScores summary added to effects and significance table · 69eb1dac
  Aliaksandr Halavatyi authored Jun 10, 2021
  
  69eb1dac
- add tvalues to the summary table · 78c80e6e
  Aliaksandr Halavatyi authored Jun 10, 2021
  
  78c80e6e
- remove the logics of duplicated pairs. Now duplicated pairs are excluded from... · 92659e8c
  Aliaksandr Halavatyi authored Jun 10, 2021
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remove the logics of duplicated pairs. Now duplicated pairs are excluded from the beginning from rlm analysis
```
  92659e8c
- correcting data counts · c5c1ba92
  Aliaksandr Halavatyi authored Jun 10, 2021
  
  c5c1ba92
09 Jun, 2021 3 commits
- add confidence intervals for regression values and data.counts · a9f17a1b
  Aliaksandr Halavatyi authored Jun 09, 2021
  
  a9f17a1b
- restructuring the repository · ba119ced
  Aliaksandr Halavatyi authored Jun 09, 2021
  
  ba119ced
- Merge branch 'ext-yunfeng.huang-master-patch-95019' into 'master' · c8d9785c
  Aliaksandr Halavatyi authored Jun 09, 2021
```
Add new directory for UKBB analysis

See merge request !1
```
  c8d9785c
23 Apr, 2021 1 commit
- Add new directory for UKBB analysis · 1a3e4b61
  Yunfeng Huang authored Apr 23, 2021
  
  1a3e4b61
29 Mar, 2021 1 commit
- median and MAD robust ZScores in the summary table · 42113351
  Aliaksandr Halavatyi authored Mar 29, 2021
  
  42113351
26 Mar, 2021 1 commit
- correcting normalisation to right neg concentration · e76f055f
  Aliaksandr Halavatyi authored Mar 26, 2021
  
  e76f055f