From 3b182c3be32edba3f7c20c1dc2a9f353387eb499 Mon Sep 17 00:00:00 2001
From: Christopher Rhodes <christopher.rhodes@embl.de>
Date: Thu, 4 Jul 2024 18:21:48 +0200
Subject: [PATCH] Started a startup-script for tests to find test data
---
conda-recipe/meta.yaml | 2 ++
tests/_conf.py | 6 ++++--
tests/run_tests.py | 14 ++++++++++++++
3 files changed, 20 insertions(+), 2 deletions(-)
create mode 100644 tests/run_tests.py
diff --git a/conda-recipe/meta.yaml b/conda-recipe/meta.yaml
index d150dc85..39965c5e 100644
--- a/conda-recipe/meta.yaml
+++ b/conda-recipe/meta.yaml
@@ -37,6 +37,8 @@ test:
imports:
- model_server
commands:
+# - echo {{ PREFIX }}
+# - set PYTHON_UNITTEST_DATA_ROOT = "{{ PREFIX }}"
- python -m unittest discover
requires:
- pip
diff --git a/tests/_conf.py b/tests/_conf.py
index 61c211af..22afb0cd 100644
--- a/tests/_conf.py
+++ b/tests/_conf.py
@@ -2,9 +2,11 @@ import os
from pathlib import Path
root = os.environ.get(
- 'PYTHON_UNITTEST_OUTPUT',
- Path.home() / 'model_server' / 'testing'
+ 'PYTHON_UNITTEST_DATA_ROOT',
+ # Path.home() / 'model_server' / 'testing'
)
+if root == None:
+ raise Exception('data directory not specified')
filename = 'D3-selection-01.czi'
czifile = {
diff --git a/tests/run_tests.py b/tests/run_tests.py
new file mode 100644
index 00000000..a4a2420b
--- /dev/null
+++ b/tests/run_tests.py
@@ -0,0 +1,14 @@
+import os
+from pathlib import Path
+import sys
+import unittest
+
+pa = Path(__file__).parent
+runner = unittest.TextTestRunner()
+
+if __name__ == '__main__':
+ # takes path to test data as first argument
+ data_dir_arg = sys.argv[1]
+ data_dir = (Path(os.getcwd()) / sys.argv[1]).resolve()
+ assert data_dir.exists(), f'Could not find test data'
+ runner.run(unittest.TestLoader().discover(data_dir))
\ No newline at end of file
--
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