From 3ccfbc98b9e822a238e60d893170ff0d083f75ed Mon Sep 17 00:00:00 2001
From: Christopher Rhodes <christopher.rhodes@embl.de>
Date: Sat, 7 Dec 2024 09:17:27 +0100
Subject: [PATCH] Adjust RoiSet focus relative to 3d patch focus
---
model_server/base/roiset.py | 5 ++++-
1 file changed, 4 insertions(+), 1 deletion(-)
diff --git a/model_server/base/roiset.py b/model_server/base/roiset.py
index 0a8775e6..41edb804 100644
--- a/model_server/base/roiset.py
+++ b/model_server/base/roiset.py
@@ -1017,7 +1017,10 @@ class RoiSet(object):
if pad_to and expanded:
patch = pad(patch, pad_to)
- return {'patch': patch, 'zif': zif}
+ return {
+ 'patch': patch,
+ 'zif': (roi.z0 + zif) if hasattr(roi, 'z0') else roi.zi,
+ }
df_processed_patches = self._df.apply(lambda r: _make_patch(r), axis=1, result_type='expand')
if update_focus_zi:
--
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