diff --git a/extensions/chaeo/examples/export_patch_focus_metrics.py b/extensions/chaeo/examples/export_patch_focus_metrics.py index 8e5fa3326b3494059404eaeba78cd41a42ad5d9b..9e668a99640ddcf1476ecdc8f9b401c73cc4d83b 100644 --- a/extensions/chaeo/examples/export_patch_focus_metrics.py +++ b/extensions/chaeo/examples/export_patch_focus_metrics.py @@ -9,7 +9,7 @@ from skimage.filters import gaussian, sobel from extensions.ilastik.models import IlastikPixelClassifierModel from extensions.chaeo.products import export_3d_patches_with_focus_metrics, export_patches_from_zstack -from extensions.chaeo.zmask import ZMaskObjectTable +from extensions.chaeo.zmask import RoiSet from model_server.accessors import generate_file_accessor, InMemoryDataAccessor, write_accessor_data_to_file from model_server.workflows import Timer @@ -58,7 +58,7 @@ def export_patch_focus_metrics_from_multichannel_zstack( # filters=zmask_filters, # expand_box_by=zmask_expand_box_by, # ) - obj_table = ZMaskObjectTable( + obj_table = RoiSet( obmask.get_one_channel_data(pixel_class), stack.get_one_channel_data(zmask_channel), mask_type=mask_type,