From 72b15b18e0565cad27bfb5d751581322124c041d Mon Sep 17 00:00:00 2001
From: Christopher Rhodes <christopher.rhodes@embl.de>
Date: Mon, 30 Oct 2023 13:19:54 +0100
Subject: [PATCH] Made filepath an explicit property
---
extensions/chaeo/accessors.py | 3 +++
extensions/chaeo/tests/test_accessors.py | 1 +
2 files changed, 4 insertions(+)
diff --git a/extensions/chaeo/accessors.py b/extensions/chaeo/accessors.py
index 928aabbc..47f33a19 100644
--- a/extensions/chaeo/accessors.py
+++ b/extensions/chaeo/accessors.py
@@ -56,6 +56,9 @@ class MonoPatchStackFromFile(MonoPatchStack):
self.file_acc = generate_file_accessor(fpath)
super().__init__(self.file_acc.data[:, :, 0, :])
+ @property
+ def fpath(self):
+ return self.file_acc.fpath
class Error(Exception):
pass
diff --git a/extensions/chaeo/tests/test_accessors.py b/extensions/chaeo/tests/test_accessors.py
index 83ea1100..40192575 100644
--- a/extensions/chaeo/tests/test_accessors.py
+++ b/extensions/chaeo/tests/test_accessors.py
@@ -38,6 +38,7 @@ class TestCziImageFileAccess(unittest.TestCase):
self.assertEqual(acc.hw, (h, w))
self.assertEqual(acc.count, n)
self.assertEqual(acc.make_tczyx().shape, (n, c, 1, h, w))
+ self.assertEqual(acc.fpath, monozstackmask['path'])
def test_raises_filenotfound(self):
from extensions.chaeo.accessors import FileNotFoundError
--
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