From 768face6286f0a225118b1e49604f9a09d2105ec Mon Sep 17 00:00:00 2001
From: Christopher Rhodes <christopher.rhodes@embl.de>
Date: Sat, 30 Nov 2024 06:38:38 +0100
Subject: [PATCH] Propagate force_tif from run_exports
---
model_server/base/roiset.py | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/model_server/base/roiset.py b/model_server/base/roiset.py
index ccd79c2d..df3714ce 100644
--- a/model_server/base/roiset.py
+++ b/model_server/base/roiset.py
@@ -19,7 +19,7 @@ from skimage.morphology import binary_dilation, disk
from .accessors import GenericImageDataAccessor, InMemoryDataAccessor, write_accessor_data_to_file
from .models import InstanceMaskSegmentationModel
-from .process import get_safe_contours, pad, rescale, make_rgb, resample_to_8bit
+from .process import get_safe_contours, pad, rescale, make_rgb
from .annotators import draw_box_on_patch, draw_contours_on_patch, draw_boxes_on_3d_image
from .accessors import generate_file_accessor, PatchStack
from .process import mask_largest_object
@@ -38,6 +38,7 @@ class PatchParams(BaseModel):
rgb_overlay_weights: List[float] = [1.0, 1.0, 1.0]
pad_to: Union[int, None] = 256
expanded: bool = False
+ force_tif: bool = False
class AnnotatedPatchParams(PatchParams):
bounding_box_channel: int = 1
--
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