From 9d49942a778f1cad6f3a67825f39ad695998468a Mon Sep 17 00:00:00 2001
From: Christopher Rhodes <christopher.rhodes@embl.de>
Date: Mon, 16 Oct 2023 17:44:32 +0200
Subject: [PATCH] Started accuracy quantification part
---
.../transfer_labels_to_ilastik_object_classifier.py | 9 ++++++++-
1 file changed, 8 insertions(+), 1 deletion(-)
diff --git a/extensions/chaeo/examples/transfer_labels_to_ilastik_object_classifier.py b/extensions/chaeo/examples/transfer_labels_to_ilastik_object_classifier.py
index 07142048..9433552e 100644
--- a/extensions/chaeo/examples/transfer_labels_to_ilastik_object_classifier.py
+++ b/extensions/chaeo/examples/transfer_labels_to_ilastik_object_classifier.py
@@ -168,4 +168,11 @@ if __name__ == '__main__':
result_acc, _ = mod.infer(train_zstack_raw, train_zstack_mask)
write_accessor_data_to_file(where_patch_stack / 'result.tif', result_acc)
- print(where_patch_stack / 'result.tif')
\ No newline at end of file
+ print(where_patch_stack / 'result.tif')
+
+ # write comparison
+ train_labels = generate_file_accessor(where_patch_stack / 'zstack_train_label.tif')
+ write_accessor_data_to_file(
+ where_patch_stack / 'comp.tif',
+ InMemoryDataAccessor(result_acc.data == train_labels.data)
+ )
\ No newline at end of file
--
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