From b934802612b4105492787202548b11665b30c1ae Mon Sep 17 00:00:00 2001
From: Christopher Rhodes <christopher.rhodes@embl.de>
Date: Wed, 18 Oct 2023 15:35:22 +0200
Subject: [PATCH] Renamed a few output files
---
.../examples/transfer_labels_to_ilastik_object_classifier.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/extensions/chaeo/examples/transfer_labels_to_ilastik_object_classifier.py b/extensions/chaeo/examples/transfer_labels_to_ilastik_object_classifier.py
index 5608417f..6dd5e27d 100644
--- a/extensions/chaeo/examples/transfer_labels_to_ilastik_object_classifier.py
+++ b/extensions/chaeo/examples/transfer_labels_to_ilastik_object_classifier.py
@@ -198,7 +198,7 @@ def compare_object_maps(truth: GenericImageDataAccessor, inferred: GenericImageD
ob_id = skimage.measure.label(inf_img)
pr = skimage.measure.regionprops_table(ob_id, properties=['label', 'area'])
mask = inf_img == pr['label'][pr['area'].argmax()]
- dd['inferred_label'] = np.unique(mask * inf_img)[1]
+ dd['inferred_label'] = np.unique(mask * inf_img)[-1] # occasionally no object in frame
dd['multiples'] = True
else: # exactly one unique object class in frame
dd['inferred_label'] = unique[1]
--
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