From 7b3267ff6dd2f2c519d3e2c51530e03faa2b897b Mon Sep 17 00:00:00 2001
From: Holger Dinkel <dinkel@embl.de>
Date: Wed, 25 Feb 2015 10:39:07 +0100
Subject: [PATCH] move currently unused files into directory _old_

---
 .gitignore                                    |  40 ++++++++----------
 .../data.plist                                |   0
 .../image1.png                                | Bin
 ...to the Linux Commandline - 1.4 - cover.png | Bin
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 .../Screen Shot 2013-05-29 at 20.52.57.png    | Bin
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 .../CertificateOfParticipation_ALC.docx       | Bin
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 .../Intermediate}/Comments.txt                |   0
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 .../Intermediate}/exercises/backupscript.sh   |   0
 .../Intermediate}/exercises/buggy_scripts.sh  |   0
 .../Intermediate}/exercises/columnchooser.sh  |   0
 .../exercises/phosphorylation_sites.csv       |   0
 .../Intermediate}/exercises/unpacker.sh       |   0
 ...inux Commandline and Basic Scripting.docx# |   0
 ... Commandline and Basic Scripting - 1.1.pdf | Bin
 ...Commandline and Basic Scripting - 1.1a.doc | Bin
 ...Commandline and Basic Scripting - 1.1a.pdf | Bin
 ...Commandline and Basic Scripting - 1.1b.doc | Bin
 ...Commandline and Basic Scripting - 1.1b.pdf | Bin
 ...mmandline and Basic Scripting - Part I.doc | Bin
 ...mandline and Basic Scripting - Part II.doc | Bin
 ...andline and Basic Scripting - appendix.doc | Bin
 ...mmandline and Basic Scripting - master.doc | Bin
 ...Linux Commandline and Basic Scripting.docx | Bin
 ... Linux Commandline and Basic Scripting.pdf | Bin
 .../LSI (Redirection).docx                    | Bin
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 .../LSI (Variables).docx                      | Bin
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 .../handout and presentation/LSI.pdf          | Bin
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 .../Scripting Exercises.docx                  | Bin
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 .../history/00README.txt                      |   0
 ...x Commandline and Basic Scripting-1.0.docx | Bin
 .../history/LSI_Handout-1.0.pdf               | Bin
 .../Intermediate}/lsi-2/images/IMG_2472.JPG   | Bin
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 .../Intermediate}/script step-by-step/1.sh    |   0
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 .../Intermediate}/script step-by-step/5.sh    |   0
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 .../Script step-by-step.docx                  | Bin
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 .../CertificateOfParticipation_ILC.docx       | Bin
 .../CertificateOfParticipation_ILC.pdf        | Bin
 {beginner => _old_/beginner}/Exercises.docx   | Bin
 {beginner => _old_/beginner}/Exercises.pdf    | Bin
 .../beginner}/Feedback_questionnaire.doc      | Bin
 .../beginner}/Feedback_questionnaire.pdf      | Bin
 .../cheatsheet/The One Page Linux Manual.pdf  | Bin
 .../beginner}/cheatsheet/fwunixref.pdf        | Bin
 .../beginner}/exercises/exercise.pdf          | Bin
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 .../beginner}/exercises/exercise_8.sh         |   0
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 {beginner => _old_/beginner}/exercises/sh     |   0
 ...uction to the Linux Commandline - 1.1.docx | Bin
 ...duction to the Linux Commandline - 1.1.pdf | Bin
 .../handout and presentation/LSB.pptx         | Bin
 .../history/00README.txt                      |   0
 ...oduction to the Linux Commandline-1.1.docx | Bin
 ...roduction to the Linux Commandline-1.1.pdf | Bin
 .../img/1280px-Unix_history-simple.svg.png    | Bin
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 .../beginner}/img/Linux Command Structure.png | Bin
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 .../about_bioit.rst                           |   0
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 {sphinx_beginner => linux_beginner}/index.rst |   0
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 .../about_bioit.rst                           |   0
 .../acknowledgments.rst                       |   0
 .../appendix.rst                              |   0
 .../basic_scripting.rst                       |   0
 .../commandlinetools.rst                      |   0
 {sphinx_combined => linux_combined}/conf.py   |   0
 .../exercises_beginner.rst                    |   0
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 {sphinx_combined => linux_combined}/index.rst |   0
 .../introduction.rst                          |   0
 {sphinx_combined => linux_combined}/links.rst |   0
 {sphinx_combined => linux_combined}/lsi.py    |   0
 .../redirection.rst                           |   0
 .../solutions.rst                             |   0
 .../solutions_beginner.rst                    |   0
 .../variables.rst                             |   0
 .../CertificateOfParticipation_ALC.docx       |   0
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 .../Feedback_questionnaire.doc                |   0
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 .../about_bioit.rst                           |   0
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 283 files changed, 18 insertions(+), 22 deletions(-)
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 rename {Intermediate => _old_/Intermediate}/CertificateOfParticipation_ALC.docx (100%)
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 rename {Intermediate => _old_/Intermediate}/handout and presentation/.~lock.Intermediate Linux Commandline and Basic Scripting.docx# (100%)
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diff --git a/.gitignore b/.gitignore
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@@ -1,27 +1,23 @@
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-Intermediate/sphinx_intermediate/_build
-sphinx_beginner/exercises_all
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+linux_beginner/_static/1280px-Unix_history-simple.svg.png
+linux_beginner/_static/File-permissions-in-Linux-2.png
+linux_beginner/_static/Unix_history-simple.svg
+linux_beginner/_build/doctrees/
+linux_beginner/_build/html/
+linux_beginner/_build/latex/
+linux_beginner/_build/singlehtml/
+linux_intermediate/_build/doctrees/
+linux_intermediate/_build/html/
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+linux_intermediate/_build/linkcheck/
+linux_combined/_build/doctrees/
+linux_combined/_build/html/
+linux_combined/_build/latex/
+linux_beginner/exercises_all
+linux_beginner/clmystery-master
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-- 
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