Commit 888971ed authored by Constantin Pape's avatar Constantin Pape

Add note on data layout

parent 08167e64
......@@ -9,7 +9,7 @@ Available tools:
## Data Layout
The goal of this small package is to provide an easy way to train different tools via the command line from the cell data layout.
The goal of this small package is to provide an easy way to train different tools via the command line from the same data layout.
In order to use it, you will need training data images and labels in the following layout:
```
root-folder/
......@@ -17,7 +17,11 @@ root-folder/
labels/
```
The folder `images` contains the training image data and `labels` the training data, i.e. the segmented ground-truth images.
The corresponding images and labels **must have exactly the same name**.
The corresponding images and labels **must have exactly the same name** and **have exactly the same size**.
The image data can be provided as 8bit or 16bit integers as well as floating point.
The label imiages should be either 16bit, 32bit or 64bit integers.
The data should be stored in tif format. For multi-channel images, we assume that they are stored channel-first, i.e. in cyx order.
......
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