Commit 96da473e authored by Christian Tischer's avatar Christian Tischer

Merge branch 'protocol-binarisation-jython' into 'master'

Protocol binarisation jython

See merge request !12
parents e6ddc70e b70a78c1
Pipeline #9763 passed with stage
in 31 seconds
...@@ -40,6 +40,12 @@ shift [fontcolor=white,color=white]; ...@@ -40,6 +40,12 @@ shift [fontcolor=white,color=white];
![binarization_figure_00](/figures/binarization_concept_example.png) ![binarization_figure_00](/figures/binarization_concept_example.png)
## Activity ## Activity
<details open>
<summary>Jython script</summary>
<br>
```python
from ij import IJ, ImagePlus
from ij.plugin import Thresholder
Open an image and binarize it by applying a threshold. Open an image and binarize it by applying a threshold.
...@@ -61,6 +67,16 @@ Open an image and binarize it by applying a threshold. ...@@ -61,6 +67,16 @@ Open an image and binarize it by applying a threshold.
inputImage=IJ.getImage()
IJ.setRawThreshold(inputImage, 60, 255, None)
binaryImage=ImagePlus('Binary image',Thresholder.createMask(inputImage))
binaryImage.show()
```
</details>
## Formative assessment ## Formative assessment
Quizz or something Quizz or something
......
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