image-analysis-training-resources merge requestshttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests2019-06-18T07:33:48Zhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/29WIP: Binarization concept2019-06-18T07:33:48ZChristian TischerWIP: Binarization conceptI found that our binarization concept map was actually an "apply threshold" concept map and I tried improving this. Below is my current version.
Suggestions for further improvements are welcome.
E.g., it would be nice if the `Apply inte...I found that our binarization concept map was actually an "apply threshold" concept map and I tried improving this. Below is my current version.
Suggestions for further improvements are welcome.
E.g., it would be nice if the `Apply intensity threshold` was visually on the same height as as `Binarization algorithm`, but I did not know how to achieve this.
```mermaid
graph TD
PV(Intensity pixel values) --> A(Binarization algorithm)
A --> BPV(Binary pixel values)
BPV --> BG("Background (0)")
BPV --> FG("Foreground (1, 255)")
A --- |e.g.|B(Apply intensity threshold)
```
```
graph TD
PV(Intensity pixel values) --> A(Binarization algorithm)
A --> BPV(Binary pixel values)
BPV --> BG("Background (0)")
BPV --> FG("Foreground (1, 255)")
A --- |e.g.|B(Apply intensity threshold)
```Aliaksandr HalavatyiAliaksandr Halavatyihttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/47Resolve "Activities shown without explicitly selecting one"2019-07-26T09:22:41ZToby HodgesResolve "Activities shown without explicitly selecting one"This should fix issue 61 in the main repoThis should fix issue 61 in the main repohttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/50WIP: Converting Difference of Gaussians module2020-04-23T14:32:10ZToby HodgesWIP: Converting Difference of Gaussians module- [x] convert module to new layout
- [x] convert concept map to `Mermaid.js`
- [ ] add learning objectives
- [ ] add prerequisites
- [ ] add motivation
- [ ] add explanatory diagram (optional)
- [ ] add exercises
- [ ] add links to modul...- [x] convert module to new layout
- [x] convert concept map to `Mermaid.js`
- [ ] add learning objectives
- [ ] add prerequisites
- [ ] add motivation
- [ ] add explanatory diagram (optional)
- [ ] add exercises
- [ ] add links to modules to learn nextalpha releasehttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/45WIP: convert Morphological Filters module to proper layout2020-04-23T14:33:19ZToby HodgesWIP: convert Morphological Filters module to proper layout@tischer @halavaty @hossain Please could one of you take a look at this and try to fill in some of the TODOs? In particular, this module still needs:
- [ ] more detail in the "Motivation" section
- [ ] platform-specific exercises
- [ ] ...@tischer @halavaty @hossain Please could one of you take a look at this and try to fill in some of the TODOs? In particular, this module still needs:
- [ ] more detail in the "Motivation" section
- [ ] platform-specific exercises
- [ ] links to appropriate "Learn Next" modules
- [ ] a figure/diagram to illustrate the concept?
You can see a built version at https://stamper.embl-community.io/image-analysis-training-resources/filter_morphologicalalpha releasehttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/49Convert Image Math module2020-04-23T14:33:38ZToby HodgesConvert Image Math moduleI've ported the "Image Math" module and changed the Gravizo concept map to Mermaid.js.
This module includes a lot of TODOs - please could someone take a look at it and add some more content (learning objectives and prerequisites at a mi...I've ported the "Image Math" module and changed the Gravizo concept map to Mermaid.js.
This module includes a lot of TODOs - please could someone take a look at it and add some more content (learning objectives and prerequisites at a minimum).
Also: why is the title "Image Math" and not "Convolution Filters" or similar?alpha releasehttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/51Update pixels.md2021-10-21T15:43:38ZChristian TischerUpdate pixels.mdChristian TischerChristian Tischerhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/41Pixel data types julius2021-10-21T15:43:51ZM. Julius HossainPixel data types juliusChristian TischerChristian Tischer