image-analysis-training-resources merge requestshttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests2019-07-26T09:29:19Zhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/48Fix error in Jekyll logic2019-07-26T09:29:19ZToby HodgesFix error in Jekyll logicCloses #61
Closes #60
The Jekyll+JS mix was missing an `{% if ... %}` tag, which was causing weird behaviour when a module had platform-specific activities but no platform-specific exercises.Closes #61
Closes #60
The Jekyll+JS mix was missing an `{% if ... %}` tag, which was causing weird behaviour when a module had platform-specific activities but no platform-specific exercises.Toby HodgesToby Hodgeshttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/46Add KNIME activities2019-07-25T14:15:02Z Stefan HelfrichAdd KNIME activitiesThis merge request adds KNIME activities for the following modules:
* Binarization
* Connected components
* Neighborhood filters
The workflow images of the activities are currently directly linked to their KNIME Hub page. That is, those...This merge request adds KNIME activities for the following modules:
* Binarization
* Connected components
* Neighborhood filters
The workflow images of the activities are currently directly linked to their KNIME Hub page. That is, those activities will not be available/shown when some is looking to run an offline training.https://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/44Style polishing2019-07-24T13:56:34ZToby HodgesStyle polishingCleaning up the style a bit more
Fixes #56
Fixes #48
Fixes #24 Cleaning up the style a bit more
Fixes #56
Fixes #48
Fixes #24 https://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/43Improve nbh2019-07-18T09:42:52ZChristian TischerImprove nbhAliaksandr HalavatyiAliaksandr Halavatyihttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/42Pixels2019-07-18T11:50:37ZChristian TischerPixelsAliaksandr HalavatyiAliaksandr Halavatyihttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/40Pixel neighbourhood conversion2019-07-18T09:30:08ZAliaksandr HalavatyiPixel neighbourhood conversionRefactoring pixel neighbourhood moduleRefactoring pixel neighbourhood moduleChristian TischerChristian Tischerhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/39Connected components2019-07-18T08:59:07ZChristian TischerConnected componentsChanged to new structureChanged to new structureAliaksandr HalavatyiAliaksandr Halavatyihttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/38Carpentries style2019-07-24T10:34:07ZToby HodgesCarpentries styleStill to do before merging:
- [x] remove superfluous Carpentries-related image files
- [x] clean up homepage styling
- [ ] add conditional to module layout to center-align concept map when no example figure is presentStill to do before merging:
- [x] remove superfluous Carpentries-related image files
- [x] clean up homepage styling
- [ ] add conditional to module layout to center-align concept map when no example figure is presentToby HodgesToby Hodgeshttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/37Add initial python materials2019-07-18T06:27:05ZConstantin PapeAdd initial python materialsAdds a python activity for binarization, including links to statically hosted jupyter notebook and binder hosted jupyter notebook from [here](https://github.com/embl-bio-it/image-analysis-with-python/blob/carpentry/image-analysis-session...Adds a python activity for binarization, including links to statically hosted jupyter notebook and binder hosted jupyter notebook from [here](https://github.com/embl-bio-it/image-analysis-with-python/blob/carpentry/image-analysis-session/image-binarization.ipynb).https://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/36Set a default platform for exercises & activities2019-07-04T10:26:27ZToby HodgesSet a default platform for exercises & activitiesFixes #45Fixes #45https://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/35add pipeline status badge to README2019-06-24T09:11:15ZToby Hodgesadd pipeline status badge to READMEhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/34add default option with no displayed div for activities and exercises2019-06-24T15:27:59ZToby Hodgesadd default option with no displayed div for activities and exercisesFixes #31
check out the working test version here: https://stamper.embl-community.io/image-analysis-training-resources/modules/binarization.htmlFixes #31
check out the working test version here: https://stamper.embl-community.io/image-analysis-training-resources/modules/binarization.htmlChristian TischerChristian Tischerhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/33Update modules2019-06-18T06:08:34ZChristian TischerUpdate modulesI am adding here all the changes from the markdown branch to the master branch, such that the master branch is now up to date.I am adding here all the changes from the markdown branch to the master branch, such that the master branch is now up to date.Aliaksandr HalavatyiAliaksandr Halavatyihttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/32Binarization update2019-06-17T07:57:39ZM. Julius HossainBinarization updateMatlab code for binarization updated - function was removedMatlab code for binarization updated - function was removedChristian TischerChristian Tischerhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/31Improve binarization module2019-06-12T11:10:49ZChristian TischerImprove binarization moduleChristian TischerChristian Tischerhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/30Improve binarization module2019-06-12T10:58:54ZChristian TischerImprove binarization moduleChristian TischerChristian Tischerhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/28Binarization2019-06-07T11:45:45ZChristian TischerBinarization- I added content to the binarization module.
- I changed the module layout to have more blank lines at some places.- I added content to the binarization module.
- I changed the module layout to have more blank lines at some places.Toby HodgesToby Hodgeshttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/27Local build2019-06-07T08:39:11ZToby HodgesLocal buildAdded instructions for building locally and included files created by local build in `.gitignore`.Added instructions for building locally and included files created by local build in `.gitignore`.Christian TischerChristian Tischerhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/26Add empty lines after activity and formative assessment drop-down menus; modu...2019-06-07T08:04:34ZChristian TischerAdd empty lines after activity and formative assessment drop-down menus; module.htmlChristian TischerChristian Tischerhttps://git.embl.de/grp-bio-it/image-analysis-training-resources/-/merge_requests/25Update module.html2019-06-07T07:41:38ZChristian TischerUpdate module.html