Commit 5a7f4c2d authored by Aliaksandr Halavatyi's avatar Aliaksandr Halavatyi

Merge branch 'ijMacroBinarization' into 'master'

Add IJ macro code for module: binarization

See merge request grp-bio-it/image-analysis-training-resources!8
parents b2f48e34 b02b5985
Pipeline #9754 passed with stages
in 1 minute and 3 seconds
......@@ -19,7 +19,6 @@ Few sentences.
## Concept map
<img src='https://g.gravizo.com/svg?
digraph G {
shift [fontcolor=white,color=white];
......@@ -36,6 +35,25 @@ shift [fontcolor=white,color=white];
## Activity
Open an image and binarize it by applying a threshold.
<details>
<summary>ImageJ user interface</summary>
- `Open...`
- "/image-analysis-training-resources/image_data/xy_8bit__two_cells.tif";
- `Threshold...`
</details>
<details>
<summary>ImageJ macro</summary>
open("/image-analysis-training-resources/image_data/xy_8bit__two_cells.tif");
setThreshold(30, 255);
setOption("BlackBackground", true);
run("Convert to Mask");
</details>
## Formative assessment
......
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