Commit 66eddf6f authored by Charles Girardot's avatar Charles Girardot

versino 1.2

parent 328520b7
* Version 1.0 is as published in BMC Bioinformatics 17(1) doi: 10.1186/s12859-016-1284-2 * Version 1.0 is as published in BMC Bioinformatics 17(1) doi: 10.1186/s12859-016-1284-2
* Version 1.1 : bug correction in header writing in paired end mode with ENSURE_IDENTICAL_HEADER_NAMES=true * Version 1.1 : bug correction in header writing in paired end mode with ENSURE_IDENTICAL_HEADER_NAMES=true
* Version 1.2 : change the logic of sample selection in PE when barcodes are identical AND redundant AND in the * Version 1.2 : change the logic of sample selection in PE when barcodes are present in both reads and redundant.
rare situation where barcodes resolve to 2 different samples with no mismatch in both cases. In this situation, In the rare situation where barcode matching resolve to 2 **different** samples with no mismatch in both cases,
the code *potentially* assigned the read to the same sample. To avoid this is the future, the read is now the code *could* assign the PE reads always to the same sample. To avoid this is the future, the PE reads are now
unassigned in this very special situation. unassigned in this very special situation.
\ No newline at end of file
...@@ -3,7 +3,7 @@ ...@@ -3,7 +3,7 @@
<modelVersion>4.0.0</modelVersion> <modelVersion>4.0.0</modelVersion>
<groupId>Je</groupId> <groupId>Je</groupId>
<artifactId>Je</artifactId> <artifactId>Je</artifactId>
<version>1.1</version> <version>1.2</version>
<name>Je</name> <name>Je</name>
<description>Je provides command line utilities to deal with barcoded FASTQ files with or without Unique Molecular Index (UMI)</description> <description>Je provides command line utilities to deal with barcoded FASTQ files with or without Unique Molecular Index (UMI)</description>
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