Commit 91d7a5b1 authored by Christian Arnold's avatar Christian Arnold
Browse files

Version 1.2.4, see Changelog for details

parent 7c9c5b7a
......@@ -53,6 +53,10 @@ We also put the paper on *bioRxiv*, please read all methodological details here:
Change log
Version 1.2.4 (2019-03-04)
- Fixed an issue with ``checkParameterValidity.R`` that caused an error message when loading TFBS files with a numeric score. Thanks to Scott Berry for pointing it out.
- Updated the TFBS_hg38_FIMO_HOCOMOCOv11 archive. The bed files are now properly pre-sorted
Version 1.2.3 (2019-02-27)
- Added a pre-compiled list of 768 human TF with in-silico predicted TFBS based on the *HOCOMOCO 11* database and *PWMScan* for hg38 as well as updating the other pre-compiled lists to account for recent changes and retractions in the *HOCOMOCO* database. See section :ref:`_parameter_dir_TFBS` for details.
- added an additional filtering in the binning step for a rare corner case due to changes in the number of samples during an analysis
......@@ -312,7 +312,7 @@ for (TFCur in allTFs) {
tableCur.df = read_tsv(fileCur, col_names = FALSE,
col_types = "ciicic")
col_types = "ciicnc")
if (nrow(problems(tableCur.df)) > 0) {
flog.fatal(paste0("Parsing errors: "), problems(tableCur.df), capture = TRUE)
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment