Commits · af11001db74372d63f9455f5f917ab9af05575a5 · Zaugg Group / diffTF

10 Dec, 2018 1 commit
- Version 1.2, see Changelog for details · af11001d
  Christian Arnold authored Dec 10, 2018
  
  af11001d
09 Dec, 2018 1 commit
- Documentation updates regarding the cluster usage of diffTF and updated... · c311749f
  Christian Arnold authored Dec 09, 2018
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Documentation updates regarding the cluster usage of diffTF and updated cluster configuration templates
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  c311749f
06 Dec, 2018 3 commits
- Documentation updates · 012f9f32
  Christian Arnold authored Dec 06, 2018
  
  012f9f32
- Updated config.json from example to avoid confusion with the TF_disabled parameter · 746cea9e
  Christian Arnold authored Dec 06, 2018
  
  746cea9e
- Doc updates · 387e909e
  Christian Arnold authored Dec 06, 2018
  
  387e909e
04 Dec, 2018 1 commit
- Updated documentation · 79aa15d2
  Christian Arnold authored Dec 04, 2018
  
  79aa15d2
07 Nov, 2018 1 commit
- Version 1.1.8, see Changelog for details · abdca3c3
  Christian Arnold authored Nov 07, 2018
  
  abdca3c3
25 Oct, 2018 1 commit
- Version 1.1.7, see Changelog for details · d8d37de5
  Christian Arnold authored Oct 25, 2018
  
  d8d37de5
11 Oct, 2018 1 commit
- Version 1.1.6, see Changelog for details · 95b75e18
  Christian Arnold authored Oct 11, 2018
  
  95b75e18
14 Aug, 2018 1 commit
- Fixed typo in checkParametrValidity that was introduced with the last commit · afac10fa
  Christian Arnold authored Aug 14, 2018
  
  afac10fa
13 Aug, 2018 1 commit
- Version 1.1.5, see Changelog · 1abe6265
  Christian Arnold authored Aug 14, 2018
  
  1abe6265
09 Aug, 2018 2 commits
- Documentation updates · a43fd127
  Christian Arnold authored Aug 09, 2018
  
  a43fd127
- Version 1.1.4, see Changelog · 60f2d373
  Christian Arnold authored Aug 09, 2018
  
  60f2d373
06 Aug, 2018 1 commit
- Version 1.1.3, see Changelog · f9c3995c
  Christian Arnold authored Aug 06, 2018
  
  f9c3995c
02 Aug, 2018 1 commit
- Version 1.1.2, see Changelog · 86df1be5
  Christian Arnold authored Aug 03, 2018
  
  86df1be5
01 Aug, 2018 4 commits
- Minor documentation updates · fedb66d6
  Christian Arnold authored Aug 01, 2018
  
  fedb66d6
- Version 1.1.1, see changelog for details · f653cb17
  Christian Arnold authored Aug 01, 2018
  
  f653cb17
- Documentation updates, prepare version 1.1.1 (see Changelog) · 03a4b949
  Christian Arnold authored Aug 01, 2018
  
  03a4b949
- Referenced the bioRxiv paper in the Documentation · cc50e08d
  Christian Arnold authored Aug 01, 2018
  
  cc50e08d
27 Jul, 2018 1 commit
- Updated to version 1.1. See changelog · 91811391
  Christian Arnold authored Jul 27, 2018
  
  91811391
25 Jul, 2018 4 commits
- Documentation: Changelog update · e8af1357
  Christian Arnold authored Jul 25, 2018
  
  e8af1357
- Fixed a corner case in 3.analyzeTF for cases when the number of TFBS is so small that DESeq fails · ae25e374
  Christian Arnold authored Jul 25, 2018
  
  ae25e374
- Added version info and changelog section in README · a1926eb1
  Christian Arnold authored Jul 25, 2018
  
  a1926eb1
- Fixed bug in 2.DiffPeaks.R that caused the pipeline to crash in some cases,... · 200f1b25
  Christian Arnold authored Jul 25, 2018
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Fixed bug in 2.DiffPeaks.R that caused the pipeline to crash in some cases, thanks to Jonas Ungerback
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  200f1b25
21 Jun, 2018 1 commit
- Fixed an issue with the linear model · 8b106a93
  Christian Arnold authored Jun 21, 2018
  
  8b106a93
07 Jun, 2018 4 commits
- Documentation improvement + change in DiffPeaks to always run DESEq · 6d2e520e
  Christian Arnold authored Jun 07, 2018
  
  6d2e520e
- Improved diagnostic plots for limma and small sign bug that caused a DESeq /... · 9afc9a95
  Christian Arnold authored Jun 07, 2018
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Improved diagnostic plots for limma and small sign bug that caused a DESeq / limma switch in the new version
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  9afc9a95
- Documentation updates · 5c7e6458
  Christian Arnold authored Jun 07, 2018
  
  5c7e6458
- Major update. Integrated old and new version into one · 21fb4f25
  Christian Arnold authored Jun 07, 2018
  
  21fb4f25
15 Dec, 2017 1 commit
- Made DESeq analysis compatible for older versions of DESeq that did not set row and column names · f3da2354
  Christian Arnold authored Dec 15, 2017
  
  f3da2354
13 Dec, 2017 2 commits
- improved macOS compatibility · 43f598b5
  Christian Arnold authored Dec 13, 2017
  
  43f598b5
- various small issues, improved macOS compatibility · 61ae0b39
  Christian Arnold authored Dec 13, 2017
  
  61ae0b39
12 Dec, 2017 3 commits
- fixed typo · a2e7e3a2
  Christian Arnold authored Dec 12, 2017
  
  a2e7e3a2
- Minor doc update for chapter 1 · a7febce5
  Christian Arnold authored Dec 12, 2017
  
  a7febce5
- Improved macOS compatibility for download script · 9542b334
  Christian Arnold authored Dec 12, 2017
  
  9542b334
11 Dec, 2017 1 commit
- Improved macOS compatibility by removing the -P from the grep command · 20d26c31
  Christian Arnold authored Dec 11, 2017
  
  20d26c31
07 Dec, 2017 3 commits
- Updated tag · 69d81c46
  Christian Arnold authored Dec 07, 2017
  
  69d81c46
- Doc. updates · 8d44d468
  Christian Arnold authored Dec 07, 2017
  
  8d44d468
- Doc. updates · 7a4f8656
  Christian Arnold authored Dec 07, 2017
  
  7a4f8656
06 Dec, 2017 1 commit
- Doc. updates · 93f79a92
  Christian Arnold authored Dec 06, 2017
  
  93f79a92