Make `gecco.orf` handle STOP codons consistently

11 jobs for master in 2 minutes and 37 seconds (queued for 10 seconds)
Name Stage Failure
failed
lint:pylint Lint
                                          by Biopython. (duplicate-code)

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Your code has been rated at 6.27/10


Cleaning up project directory and file based variables

ERROR: Job failed: command terminated with exit code 1

failed
lint:mypy Lint
gecco/hmmer/__init__.py:140: error: Unused "type: ignore" comment
gecco/crf/__init__.py:201: error: Unused "type: ignore" comment
gecco/cli/commands/_mixins.py:375: error: Unused "type: ignore" comment
gecco/cli/commands/cv.py:149: error: Unused "type: ignore" comment
Found 6 errors in 5 files (checked 27 source files)

Cleaning up project directory and file based variables

ERROR: Job failed: command terminated with exit code 1