Commit 17286821 authored by Jakob Wirbel's avatar Jakob Wirbel

update check.confounders: pass un-altered metadata (i.e. non-factorized) to...

update check.confounders: pass un-altered metadata (i.e. non-factorized) to the function that plots barplots/qq-plots.
parent dcdd5454
......@@ -107,7 +107,8 @@ check.confounders <- function(siamcat, fn.plot, meta.in = NULL, verbose = 1) {
confounders.glm.auroc.plot(glm.data)
# THIRD PLOT(S) - original confounder check descriptive stat plots
confounders.descriptive.plots(meta, label, verbose)
confounders.descriptive.plots(meta(siamcat)[,colnames(meta)],
label, verbose)
dev.off()
e.time <- proc.time()[3]
......
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