SIAMCAT issueshttps://git.embl.de/grp-zeller/SIAMCAT/-/issues2018-04-17T09:42:48Zhttps://git.embl.de/grp-zeller/SIAMCAT/-/issues/27Update galaxy interface2018-04-17T09:42:48ZKonrad ZychUpdate galaxy interface- [ ] incorporate latest version
- [ ] test
- [ ] :package: ship it- [ ] incorporate latest version
- [ ] test
- [ ] :package: ship itPublicationhttps://git.embl.de/grp-zeller/SIAMCAT/-/issues/77Prune metadata function2018-05-17T10:09:42ZKonrad ZychPrune metadata function### Summary
A new function to prune metadata.
/cc @zych### Summary
A new function to prune metadata.
/cc @zychPublicationKonrad ZychKonrad Zychhttps://git.embl.de/grp-zeller/SIAMCAT/-/issues/44Evolve to tidyverse2018-02-26T06:18:25ZKonrad ZychEvolve to tidyverse- [ ] elapsed time formatted with lubridate
- [x] documentation website with pkgdown
- [ ] ...- [ ] elapsed time formatted with lubridate
- [x] documentation website with pkgdown
- [ ] ...https://git.embl.de/grp-zeller/SIAMCAT/-/issues/21Visualization with iTOL2018-02-19T20:12:10ZKonrad ZychVisualization with iTOL- [ ] making sure we know how to easily integrate those two tools :recycle:
- [ ] output of the model in a format that iTOL can easily use :deciduous_tree:- [ ] making sure we know how to easily integrate those two tools :recycle:
- [ ] output of the model in a format that iTOL can easily use :deciduous_tree:PublicationKonrad ZychKonrad Zychhttps://git.embl.de/grp-zeller/SIAMCAT/-/issues/20Log R-script run into Rmd file2018-02-12T14:14:57ZKonrad ZychLog R-script run into Rmd fileThe log of R-script flavor execution should land in one neat R markdown file :ok_hand_tone1:
- [ ] each file starts with ##heading with name of the function\
- [ ] ###heading: paramaters of the run
- [ ] all the parameters of the run are...The log of R-script flavor execution should land in one neat R markdown file :ok_hand_tone1:
- [ ] each file starts with ##heading with name of the function\
- [ ] ###heading: paramaters of the run
- [ ] all the parameters of the run are saved :floppy_disk: there
- [ ] ###heading: results of the run
- [ ] all the verbose results of the run
- [ ] (optional): parameter for the user to choose screen/RmdPublicationKonrad ZychKonrad Zych