SIAMCAT issueshttps://git.embl.de/grp-zeller/SIAMCAT/-/issues2017-10-02T11:04:33Zhttps://git.embl.de/grp-zeller/SIAMCAT/-/issues/15Update how plm.predictor takes in the test data2017-10-02T11:04:33ZJakob WirbelUpdate how plm.predictor takes in the test dataCurrently, plm.predict takes a set of features and labels as test data.
But it would be better if it could, analogously to plm.trainer, take the list returned by data.splitter as inputCurrently, plm.predict takes a set of features and labels as test data.
But it would be better if it could, analogously to plm.trainer, take the list returned by data.splitter as inputNijmegen conferenceKonrad ZychKonrad Zychhttps://git.embl.de/grp-zeller/SIAMCAT/-/issues/8Update documentation for eval.result()2017-09-29T14:55:28ZJakob WirbelUpdate documentation for eval.result()Nijmegen conferenceJakob WirbelJakob Wirbelhttps://git.embl.de/grp-zeller/SIAMCAT/-/issues/13Update how plm.trainer takes in the training instances2017-09-28T11:52:47ZJakob WirbelUpdate how plm.trainer takes in the training instancesCurrently, the training instance indices have to be supplied to plm.trainer as file. Should be adjusted so that the function does not read/write data to diskCurrently, the training instance indices have to be supplied to plm.trainer as file. Should be adjusted so that the function does not read/write data to diskNijmegen conferencehttps://git.embl.de/grp-zeller/SIAMCAT/-/issues/7Update data.splitter()2017-09-28T11:52:23ZJakob WirbelUpdate data.splitter()- [x] delete/work on `inseparable` parameter
- [x] delete `meta` parameter
- provide default values?- [x] delete/work on `inseparable` parameter
- [x] delete `meta` parameter
- provide default values?Nijmegen conferencehttps://git.embl.de/grp-zeller/SIAMCAT/-/issues/17Taking care of the utils.R2017-09-28T11:51:24ZKonrad ZychTaking care of the utils.R- [x] removing all the :poop: `make_xyz_options` functions from the utils file
- [x] removing all the :poop: `make_xyz_options` functions from the R_script file
- [x] renaming it to read_data.R
- [x] add some docs for the read functions ...- [x] removing all the :poop: `make_xyz_options` functions from the utils file
- [x] removing all the :poop: `make_xyz_options` functions from the R_script file
- [x] renaming it to read_data.R
- [x] add some docs for the read functions (see Georg's readme and copy from there about file formats). Do not spend too much time here, once the structure is done there will be aconstructor function that would not expose any of those to the user!Nijmegen conferenceJakob WirbelJakob Wirbelhttps://git.embl.de/grp-zeller/SIAMCAT/-/issues/4Splitting the core_functions file2017-09-28T09:58:42ZKonrad ZychSplitting the core_functions filesplitting this one massive file :shit: into separated files:
1. each core functions goes to a separated file
2. file name is the name of the function
3. all relevant utils are moved to the new function file from the terrible util files :...splitting this one massive file :shit: into separated files:
1. each core functions goes to a separated file
2. file name is the name of the function
3. all relevant utils are moved to the new function file from the terrible util files :poop:
4. everyting is awesome :cool: :sunglasses: :sunglasses: :sunglasses:Nijmegen conferenceJakob WirbelJakob Wirbel