Bioconductor submission checklist
- clone to GitHub/ check if it could be submitted from git.embl
- R CMD check with no warnings and errors
- R CMD BiocCheck with no warnings and errors
- R CMD BiocCheck notes - careful with those
- siamcat_example does not work with log.std normalization
- replacing previous import ‘mlr::auc’ by ‘pROC::auc’ when loading ‘SIAMCAT -> importsFrom should solve it but seems not to work properly?
- The result of R CMD build must be less than 4MB
- R CMD check must complete within 5 minutes
- Set Version: 0.99.0 in the DESCRIPTION
- Include an inst/NEWS file for providing users with information on package updates
- NOTE: Consider shorter lines
- NOTE: Consider multiples of 4 spaces for line indents
To upload designs, you'll need to enable LFS and have an admin enable hashed storage. More information