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SIAMCAT
SIAMCAT
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  • #52

Closed
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Opened Mar 28, 2018 by Konrad Zych@zychMaintainer10 of 12 tasks completed10/12 tasks

Bioconductor submission checklist

  • clone to GitHub/ check if it could be submitted from git.embl
  • R CMD check with no warnings and errors
  • R CMD BiocCheck with no warnings and errors
  • R CMD BiocCheck notes - careful with those
  • siamcat_example does not work with log.std normalization
  • replacing previous import ‘mlr::auc’ by ‘pROC::auc’ when loading ‘SIAMCAT -> importsFrom should solve it but seems not to work properly?
  • The result of R CMD build must be less than 4MB
  • R CMD check must complete within 5 minutes
  • Set Version: 0.99.0 in the DESCRIPTION
  • Include an inst/NEWS file for providing users with information on package updates
  • NOTE: Consider shorter lines
  • NOTE: Consider multiples of 4 spaces for line indents
Edited Mar 30, 2018 by Konrad Zych
To upload designs, you'll need to enable LFS and have admin enable hashed storage. More information
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Bioconductor submission
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Bioconductor submission
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Mar 29, 2018
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Mar 29, 2018
Reference: grp-zeller/SIAMCAT#52