GitLab

• clone to GitHub/ check if it could be submitted from git.embl
• R CMD check with no warnings and errors
• R CMD BiocCheck with no warnings and errors
• R CMD BiocCheck notes - careful with those
• siamcat_example does not work with log.std normalization
• replacing previous import ‘mlr::auc’ by ‘pROC::auc’ when loading ‘SIAMCAT -> importsFrom should solve it but seems not to work properly?
• The result of R CMD build must be less than 4MB
• R CMD check must complete within 5 minutes
• Set Version: 0.99.0 in the DESCRIPTION
• Include an inst/NEWS file for providing users with information on package updates
• NOTE: Consider shorter lines
• NOTE: Consider multiples of 4 spaces for line indents