Vignette - how to get your data into SIAMCAT
Summary
A vignette that shows crucial steps in reading in and preprocessing your data to use in SIAMCAT
Goals/sub-features
-
loading different data types with phyloseq -
reading SIAMCAT type text files -
adding phyloseq-class object to siamcat-class object
/cc @zych
Edited by Konrad Zych