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SIAMCAT
SIAMCAT
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  • SIAMCATSIAMCAT
  • Issues

  • Open 13
  • Closed 93
  • All 106
New issue
  • Priority Created date Last updated Milestone due date Due date Popularity Label priority Manual
  • Base bipartite intro map   2 of 2 tasks completed
    #75 · opened May 02, 2018 by Morgan Essex   May 10, 2018   beautification code confounders   3d
    • CLOSED
    • 0
    updated May 11, 2018
  • Visualize blocking results
    #71 · opened Apr 19, 2018 by Morgan Essex   May 9, 2018   beautification code confounders in-progress   2d
    • CLOSED
    • 0
    updated May 16, 2018
  • Metadata GLMs   3 of 3 tasks completed
    #74 · opened Apr 24, 2018 by Morgan Essex   May 2, 2018   code confounders in-progress   3d
    • CLOSED
    • 0
    updated Apr 30, 2018
  • Legends for network graph   2 of 2 tasks completed
    #72 · opened Apr 23, 2018 by Morgan Essex   Apr 24, 2018   beautification confounders in-progress   3h
    • CLOSED
    • 0
    updated Apr 23, 2018
  • Bipartite network graph for metadata & feature visualization   3 of 3 tasks completed
    #70 · opened Apr 19, 2018 by Morgan Essex   Apr 20, 2018   code confounders feature in-progress   2d
    • CLOSED
    • 0
    updated Apr 23, 2018
  • Bioconductor submission checklist   10 of 12 tasks completed
    #52 · opened Mar 28, 2018 by Konrad Zych   Bioconductor submission   Mar 29, 2018   beautification code docs urgent   1d
    • CLOSED
    • 0
    updated Mar 30, 2018
  • Verbose   10 of 12 tasks completed
    #37 · opened Feb 09, 2018 by Konrad Zych   Version 0.4.0   Feb 23, 2018   beautification code feature   4h
    • CLOSED
    • 0
    updated Feb 26, 2018
  • Code cleaning November
    #29 · opened Nov 22, 2017 by Konrad Zych   Version 0.3.0   Nov 30, 2017   beautification code
    • CLOSED
    • 0
    updated Dec 07, 2017
  • parameter for `evaluation.plot`
    #107 · opened Nov 08, 2019 by Jakob Wirbel   beautification feature-request
    • CLOSED
    • 1
    updated Jan 31, 2020
  • Feature request: warning if the species are too long to fit on the association plot
    #106 · opened Nov 01, 2019 by Jakob Wirbel   beautification feature-request
    • 0
    updated Nov 01, 2019
  • special characters in label names are removed
    #105 · opened Oct 14, 2019 by Jakob Wirbel
    • CLOSED
    • 0
    updated Oct 14, 2019
  • include feature weights in the models slot of the siamcat object?
    #104 · opened Sep 17, 2019 by Jakob Wirbel   maybe
    • 0
    updated Sep 17, 2019
  • some minor issues with the multiple hypothesis testing in check.associations
    #103 · opened Sep 17, 2019 by Jakob Wirbel
    • CLOSED
    • 0
    updated Oct 14, 2019
  • NEWS for Release 3.9
    #102 · opened Apr 24, 2019 by Konrad Zych
    • 1
    updated Apr 25, 2019
  • Feature request for check.associations
    #101 · opened Feb 07, 2019 by Konrad Zych   code feature-request
    • 1
    updated Feb 07, 2019
  • bug in evaluate.predictions()
    #100 · opened Jan 09, 2019 by Konrad Zych   bug urgent
    • CLOSED
    • 0
    updated Jan 09, 2019
  • Bug in siamcat() creator function
    #99 · opened Jan 08, 2019 by Konrad Zych   bug code urgent   1h
    • CLOSED
    • 2
    updated Jan 09, 2019
  • Figure out how to take care of the Rscript flavor
    #98 · opened Oct 01, 2018 by Konrad Zych   bioconductor code urgent
    • 1
    updated Oct 01, 2018
  • feature_weights/weight_matrix compute on the fly
    #97 · opened Aug 24, 2018 by Jakob Wirbel   feature-request
    • CLOSED
    • 0
    updated Sep 07, 2018
  • on which type of features should the function work?   8 of 8 tasks completed
    #96 · opened Aug 24, 2018 by Jakob Wirbel   feature-request
    • CLOSED
    • 0
    updated Oct 01, 2018
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