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Zeller Group
metaG_course_2021_10_07
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53c9bf02
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53c9bf02
authored
Oct 06, 2021
by
Alessio Milanese
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Update README.md
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@@ -222,7 +222,7 @@ conda activate mgcourse
# Practical 2: Taxonomic profiling
Objectives of the practical:
-
Learn how to create a taxonomic profile for a (quality filtered) metagenomic sample using mOTUs
2
;
-
Learn how to create a taxonomic profile for a (quality filtered) metagenomic sample using mOTUs;
-
Familiarise with the parameters and the output of a taxonomic profiling tool;
-
Learn how to merge many taxonomic profile files (all the profiles from your study) into one file.
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@@ -452,7 +452,7 @@ More information can be found also in [this protocol paper](https://currentproto
We can have a look at the result. The
`-A`
in mOTUs change the result (
`head human_gut.motus`
):
```
#mOTUs
2
_clade unnamed sample
#mOTUs_clade unnamed sample
k__Bacteria 0.9481725845
k__Bacteria|p__Proteobacteria 0.0089415128
k__Bacteria|p__Firmicutes 0.3280255558
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