... | ... | @@ -3,12 +3,12 @@ Note: These instructions assume a Linux operating system. They've been shown to |
|
|
## Requirements
|
|
|
|
|
|
The IDE needs a computer with an [R environment version >=3.5.0](https://www.r-project.org/). The IDE requires some R packages and will try to install them if it can't detect them on the system. In case of problems, it may be better to install the required packages manually.
|
|
|
The IDE requires the following packages from CRAN: devtools, DT, shiny, shinyFiles, shinycssloaders, shinydashboard, shinyjs, shinyWidgets, shinybusy, assertthat, ggplot2, plotly, RANN, MASS, uwot, xgboost, Ckmeans.1d.dp, e1071, caret.
|
|
|
The IDE requires the following packages from CRAN: devtools, DT, shiny, shinyFiles, shinycssloaders, shinydashboard, shinyjs, shinyWidgets, shinybusy, assertthat, ggplot2, plotly, RANN, MASS, uwot, xgboost, Ckmeans.1d.dp, e1071, caret, RColorBrewer.
|
|
|
|
|
|
From within an R console, install with:
|
|
|
|
|
|
```
|
|
|
> install.packages("devtools", "DT", "shiny", "shinyFiles", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "shinybusy", "assertthat", "ggplot2", "plotly", "RANN", "MASS", "uwot", "xgboost", "Ckmeans.1d.dp", "e1071", "caret")
|
|
|
> install.packages("devtools", "DT", "shiny", "shinyFiles", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "shinybusy", "assertthat", "ggplot2", "plotly", "RANN", "MASS", "uwot", "xgboost", "Ckmeans.1d.dp", "e1071", "caret", "RColorBrewer")
|
|
|
```
|
|
|
|
|
|
and from Bioconductor: EBImage and RBioFormats
|
... | ... | |