From f4cd7e0b071c6626c59862a26fb350f6cc3e39c9 Mon Sep 17 00:00:00 2001
From: Malvika Sharan <malvika.sharan@embl.de>
Date: Wed, 2 Nov 2016 13:46:52 +0100
Subject: [PATCH] Update README.md
---
README.md | 20 +++++++++-----------
1 file changed, 9 insertions(+), 11 deletions(-)
diff --git a/README.md b/README.md
index 91b03af..caa4d5a 100644
--- a/README.md
+++ b/README.md
@@ -23,14 +23,14 @@
- HHPred
3. Multiple sequence alignments: Malvika
- Muscle, Clustal omega, etc.
- - EMBOSS dot-plot
4. Other resources: Toby & Malvika
- Human portein atlas
- Antibodypedia
- - EMBOSS toolkits
- - Pepinfo
- - Sixpack
- - dotmatcher
+ - EMBOSS toolkits (EBI)
+ - EMBOSS dot-plot
+ - dotmatcher
+ - Pepinfo
+ - Sixpack
**Part-2 Protein structure analysis**
@@ -39,11 +39,9 @@
1. Protein Structures: Toby
- Structure dtabase: PDB
- Structure visualization
- - Chimera V2
+ - Chimera
2. Structure prediction: Malvika
- - jpred
- - Jalview linked tool Janet
- - PSIpred
+ - jpred: Jalview
- Tertiary structure prediction: Phyre2, I-TASSER
3. Domain databases: Manjeet
- InterPro & InterProScan
@@ -52,9 +50,9 @@
- SCOP
4. Prediction of transmembrane helices in proteins: Manjeet
- TMHMM
-5. Intrinsically disordered region : Marc
+ - IUPRED and Anchor
+5. Intrinsically disordered region: Marc
- ELM
- - IUPRED
- DISPROT
6. Motif visualization: Toby
- Jalview
--
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