diff --git a/.github/workflows/package.yml b/.github/workflows/package.yml index ee2936a700fd2311e874cc79be916c6d20cec1c6..afa9e93e2fd6595229b39992f5393f344d5d2eff 100644 --- a/.github/workflows/package.yml +++ b/.github/workflows/package.yml @@ -39,7 +39,7 @@ jobs: CIBW_BUILD_VERBOSITY: 2 CIBW_BEFORE_BUILD: pip install cython CIBW_TEST_COMMAND: python -m unittest pyfastani.tests -vv - CIBW_TEST_REQUIRES: importlib-resources biopython scikit-bio + CIBW_TEST_REQUIRES: importlib-resources biopython with: output-dir: dist - uses: actions/upload-artifact@v3 @@ -78,7 +78,7 @@ jobs: CIBW_BEFORE_BUILD: pip install cython CIBW_BUILD_VERBOSITY: 2 CIBW_TEST_COMMAND: python -m unittest pyfastani.tests -vv - CIBW_TEST_REQUIRES: importlib-resources biopython scikit-bio + CIBW_TEST_REQUIRES: importlib-resources biopython with: output-dir: dist - uses: actions/upload-artifact@v3 @@ -117,7 +117,7 @@ jobs: CIBW_BEFORE_BUILD: pip install cython CIBW_BUILD_VERBOSITY: 2 CIBW_TEST_COMMAND: python -m unittest pyfastani.tests -vv - CIBW_TEST_REQUIRES: importlib-resources biopython scikit-bio + CIBW_TEST_REQUIRES: importlib-resources biopython with: output-dir: dist - uses: actions/upload-artifact@v3 @@ -152,7 +152,7 @@ jobs: CIBW_BEFORE_BUILD: pip install cython CIBW_BUILD_VERBOSITY: 2 CIBW_TEST_COMMAND: python -m unittest pyfastani.tests -vv - CIBW_TEST_REQUIRES: importlib-resources biopython scikit-bio + CIBW_TEST_REQUIRES: importlib-resources biopython with: output-dir: dist - uses: actions/upload-artifact@v3 diff --git a/CHANGELOG.md b/CHANGELOG.md index 2af56b22133aed038d36cc10fcdd13034c206e60..ce5299c99d14e1fde784f27082cf6e0696721771 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -6,7 +6,18 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0. ## [Unreleased] -[Unreleased]: https://github.com/althonos/pyfastani/compare/v0.4.1...HEAD +[Unreleased]: https://github.com/althonos/pyfastani/compare/v0.5.0...HEAD + + +## [v0.5.0] - 2023-07-22 +[v0.5.0]: https://github.com/althonos/pyfastani/compare/v0.4.1...v0.5.0 + +### Changed +- Bump Cython dependency to `v3.0`. + +### Fixed +- Add missing signature of `Sketch.index` to type stubs. +- PyPy builds failing on missing `PyInterpreterState_GetID` function. ## [v0.4.1] - 2022-08-20 diff --git a/pyfastani/__init__.py b/pyfastani/__init__.py index f92fc46a4d4f1553a7fbebc234a12eb1ce179998..7bb583599f290ea39aa0aa046783017f89ddc38e 100644 --- a/pyfastani/__init__.py +++ b/pyfastani/__init__.py @@ -12,7 +12,7 @@ from ._fastani import ( __author__ = "Martin Larralde <martin.larralde@embl.de>" __license__ = "MIT" -__version__ = "0.4.1" +__version__ = "0.5.0" __doc__ = _fastani.__doc__ __all__ = [ diff --git a/setup.cfg b/setup.cfg index e5af16e3fed4d099527fb6a4ccedad64d709fdb2..2754d6bbf7188775c6f9ef723481085037b12b0d 100644 --- a/setup.cfg +++ b/setup.cfg @@ -27,6 +27,7 @@ classifier = Programming Language :: Python :: 3.8 Programming Language :: Python :: 3.9 Programming Language :: Python :: 3.10 + Programming Language :: Python :: 3.11 Programming Language :: Python :: Implementation :: CPython Programming Language :: Python :: Implementation :: PyPy Topic :: Scientific/Engineering :: Bio-Informatics