diff --git a/docs/_images/logo.png b/docs/_images/logo.png new file mode 120000 index 0000000000000000000000000000000000000000..9811a578650f93dec75ce20b1b81bac53013b738 --- /dev/null +++ b/docs/_images/logo.png @@ -0,0 +1 @@ +../../static/logo.png \ No newline at end of file diff --git a/docs/conf.py b/docs/conf.py index c571535af536b33cc20d178afa5da9c87d7df6bc..29873591907b774752d7a4b642f70f149c21fd6e 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -140,6 +140,8 @@ html_theme_options = { ], "logo": { "text": "PyHMMER", + "image_light": "_images/logo.png", + "image_dark": "_images/logo.png", }, "navbar_align": "left", "footer_start": ["copyright"], diff --git a/docs/index.rst b/docs/index.rst index 3c58a8db6f5b633c8ded9dbb5937cfa68eccdd61..24a6651af0d78367af35cebe763ee7bff0c56593 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -146,7 +146,7 @@ The following Python libraries may be of interest for bioinformaticians. :gutter: 1 .. grid-item-card:: :fas:`diamond` PyHMMER - :link: https://pyrodigal.readthedocs.io + :link: https://pyhmmer.readthedocs.io Profile Hidden Markov Models (with HMMER). @@ -245,9 +245,11 @@ License ------- This library is provided under the `MIT License <https://choosealicense.com/licenses/mit/>`_. -The HMMER3 and Easel code is available under -the `BSD 3-clause <https://choosealicense.com/licenses/bsd-3-clause/>`_ license, -which allows redistribution of their sources in the ``pyhmmer`` distribution. +The Easel and HMMER3 codes are available under +the `BSD <https://choosealicense.com/licenses/bsd-2-clause/>`_ and +`BSD 3-clause <https://choosealicense.com/licenses/bsd-3-clause/>`_ licenses +respectively, which both allow redistribution of the sources in the +``pyhmmer`` distribution. See the :doc:`Copyright Notice <guide/copyright>` section for more information. *This project is in no way not affiliated, sponsored, or otherwise endorsed by the original* `HMMER <http://hmmer.org>`_ *authors. It was developed by* diff --git a/static/logo.png b/static/logo.png new file mode 100644 index 0000000000000000000000000000000000000000..bcbccea1b48213ad213fca4cdb6e88855dedc174 Binary files /dev/null and b/static/logo.png differ