diff --git a/pyhmmer/hmmer.py b/pyhmmer/hmmer.py index 685dc9b5f1382f0b9f80f4b6e22323919a89f915..4b5a9bd7428a7ccabfd6eb58e5b1fb2310048e64 100644 --- a/pyhmmer/hmmer.py +++ b/pyhmmer/hmmer.py @@ -1533,8 +1533,8 @@ if __name__ == "__main__": print( hit.name.decode(), (hit.accession or b"-").decode(), - (hits.query_name or b"-").decode(), - (hits.query_accession or b"-").decode(), + (hits.query.name or b"-").decode(), + (hits.query.accession or b"-").decode(), hit.evalue, hit.score, hit.bias, @@ -1655,8 +1655,8 @@ if __name__ == "__main__": print( hit.name.decode(), (hit.accession or b"-").decode(), - (hits.query_name or b"-").decode(), - (hits.query_accession or b"-").decode(), + (hits.query.name or b"-").decode(), + (hits.query.accession or b"-").decode(), hit.evalue, hit.score, hit.bias, diff --git a/pyhmmer/plan7.pyi b/pyhmmer/plan7.pyi index 5c9fd058ac03bb70ca9ef48eba1a65e4025a0407..4e8023c8c312528e7fa755225d1c98ce3f4d1fb4 100644 --- a/pyhmmer/plan7.pyi +++ b/pyhmmer/plan7.pyi @@ -875,6 +875,8 @@ class TopHits(typing.Sequence[Hit]): @property def query_length(self) -> int: ... @property + def query(self) -> typing.Union[DigitalSequence, DigitalMSA, HMM, Profile, OptimizedProfile]: ... + @property def Z(self) -> float: ... @property def domZ(self) -> float: ...