Return double precision numbers from `Node._intergenic_mod` functions

pyrodigal/_pyrodigal.pxd

@@ -139,19 +139,19 @@ cdef class Node:
     cdef _node* node
 
     @staticmethod
-    cdef float _intergenic_mod(
+    cdef double _intergenic_mod(
         const _node* n1,
         const _node* n2,
         const double start_weight
     ) nogil
     @staticmethod
-    cdef float _intergenic_mod_same(
+    cdef double _intergenic_mod_same(
         const _node* n1,
         const _node* n2,
         const double start_weight
     ) nogil
     @staticmethod
-    cdef float _intergenic_mod_diff(
+    cdef double _intergenic_mod_diff(
         const _node* n1,
         const _node* n2,
         const double start_weight

pyrodigal/_pyrodigal.pyx

@@ -1278,7 +1278,7 @@ cdef class Node:
     # --- C interface --------------------------------------------------------
 
     @staticmethod
-    cdef float _intergenic_mod(
+    cdef double _intergenic_mod(
         const _node* n1,
         const _node* n2,
         const double start_weight
@@ -1291,7 +1291,7 @@ cdef class Node:
             return Node._intergenic_mod_diff(n1, n2, start_weight)
 
     @staticmethod
-    cdef float _intergenic_mod_same(
+    cdef double _intergenic_mod_same(
         const _node* n1,
         const _node* n2,
         const double start_weight
@@ -1318,7 +1318,7 @@ cdef class Node:
         return rval
 
     @staticmethod
-    cdef float _intergenic_mod_diff(
+    cdef double _intergenic_mod_diff(
         const _node* n1,
         const _node* n2,
         const double start_weight

pyrodigal/tests/test_connection_scorer.py

@@ -19,11 +19,11 @@ class TestConnectionScorer(unittest.TestCase):
         self.assertEqual(n1.edge, n2.edge)
         self.assertEqual(n1.gc_bias, n2.gc_bias)
         self.assertEqual(n1.gc_cont, n2.gc_cont)
-        self.assertAlmostEqual(n1.score, n2.score, places=4)
-        self.assertAlmostEqual(n1.cscore, n2.cscore, places=4)
-        self.assertAlmostEqual(n1.rscore, n2.rscore, places=4)
-        self.assertAlmostEqual(n1.sscore, n2.sscore, places=4)
-        self.assertAlmostEqual(n1.tscore, n2.tscore, places=4)
+        self.assertAlmostEqual(n1.score, n2.score)
+        self.assertAlmostEqual(n1.cscore, n2.cscore)
+        self.assertAlmostEqual(n1.rscore, n2.rscore)
+        self.assertAlmostEqual(n1.sscore, n2.sscore)
+        self.assertAlmostEqual(n1.tscore, n2.tscore)
 
     @classmethod
     def setUpClass(cls):