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Martin Larralde
pyrodigal
Commits
d9e938ad
Commit
d9e938ad
authored
Apr 18, 2022
by
Martin Larralde
Browse files
Add a doc section on how to install from the Arch User Repository [ci skip]
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79dacd3f
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#32273
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@@ -19,7 +19,7 @@ one is available, or from source after compiling the Cython code :
.. code:: console
$ pip install --user pyrodigal
$ pip install --user pyrodigal
Conda
^^^^^
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@@ -30,7 +30,22 @@ use the ``conda`` installer:
.. code:: console
$ conda install -c bioconda pyrodigal
$ conda install -c bioconda pyrodigal
Arch User Repository
^^^^^^^^^^^^^^^^^^^^
A package recipe for Arch Linux can be found in the Arch User Repository
under the name `python-pyrodigal <https://aur.archlinux.org/packages/python-pyrodigal>`_.
It will always match the latest release from PyPI.
Steps to install on ArchLinux depend on your `AUR helper <https://wiki.archlinux.org/title/AUR_helpers>`_
(``yaourt``, ``aura``, ``yay``, etc.). Steps for ``aura`` are:
.. console::
$ aura -A python-pyrodigal
GitHub + ``pip``
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@@ -41,8 +56,8 @@ the repository and install the repository by running (with the admin rights):
.. code:: console
$ git clone --recursive https://github.com/althonos/pyrodigal
$ pip install --user ./pyrodigal
$ git clone --recursive https://github.com/althonos/pyrodigal
$ pip install --user ./pyrodigal
.. caution::
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@@ -59,10 +74,10 @@ build dependencies (mainly `Cython <https://pypi.org/project/cython>`_):
.. code:: console
$ git clone --recursive https://github.com/althonos/pyrodigal
$ cd pyrodigal
$ python setup.py build_ext
# python setup.py install
$ git clone --recursive https://github.com/althonos/pyrodigal
$ cd pyrodigal
$ python setup.py build_ext
# python setup.py install
.. Danger::
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