new R version

parent 9d06c726
Pipeline #16467 passed with stage
in 12 minutes and 14 seconds
FROM rocker/shiny:3.6.2
FROM rocker/shiny:3.5.1
RUN apt-get update && apt-get install -y libcurl4-openssl-dev \
libfftw3-dev libjpeg-dev libtiff-dev \
......
......@@ -37,9 +37,9 @@ server <- function(input, output, session) {
query <- parseQueryString(isolate(session$clientData$url_search))
#query <- c("dataset" = "Tcells.rda")
# s3con <- s3connection(paste0("seuratapp/",query["dataset"]),bucket = "lsteinme-shiny",region="")
# load(s3con)
# close(s3con)
s3con <- s3connection(paste0("seuratapp/",query["dataset"]),bucket = "lsteinme-shiny",region="")
load(s3con)
close(s3con)
updateSelectizeInput(session, "tsne.gene",choices = rownames(scaled))
updateSelectizeInput(session, "tsne.type",choices = c("Clusters","Gene",colnames(metadata)))
......
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