re

parent f4176cbe
Pipeline #14797 canceled with stage
in 2 minutes and 45 seconds
......@@ -9,10 +9,14 @@ ADD ./etc/ /etc/shiny-server/
ADD ./app/ /srv/shiny-server/
COPY ./packages.R packages.R
COPY ./packages1.R packages1.R
COPY ./packages2.R packages2.R
COPY ./aws.s3-master /tmp/aws.s3-master
RUN Rscript packages.R
RUN Rscript packages1.R
RUN Rscript packages2.R
EXPOSE 3838
# allow permission
RUN sudo chown -R shiny:shiny /srv/shiny-server
# run app
CMD ["/usr/bin/shiny-server.sh"]
......@@ -6,12 +6,12 @@ install.packages("stringr")
install.packages("curl")
install.packages("httr")
install.packages("xml2")
#install.packages("aws.signature")
#install.packages("aws.s3")
install.packages("aws.signature")
install.packages("aws.s3")
#install.packages("BiocManager")
#BiocManager::install("limma")
#BiocManager::install("edgeR")
#BiocManager::install("EBImage")
install.packages("BiocManager")
BiocManager::install("limma")
BiocManager::install("edgeR")
BiocManager::install("EBImage")
#install.packages("/tmp/aws.s3-master/", repos=NULL)
install.packages("/tmp/aws.s3-master/", repos=NULL)
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