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Commit d7198f3b authored by Josep Manel Andres Moscardo's avatar Josep Manel Andres Moscardo
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parent f4176cbe
Pipeline #14797 canceled with stage
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    Dockerfile
    View file @ d7198f3b
    ......@@ -9,10 +9,14 @@ ADD ./etc/ /etc/shiny-server/
    ADD ./app/ /srv/shiny-server/
    COPY ./packages.R packages.R
    COPY ./packages1.R packages1.R
    COPY ./packages2.R packages2.R
    COPY ./aws.s3-master /tmp/aws.s3-master
    RUN Rscript packages.R
    RUN Rscript packages1.R
    RUN Rscript packages2.R
    EXPOSE 3838
    # allow permission
    RUN sudo chown -R shiny:shiny /srv/shiny-server
    # run app
    CMD ["/usr/bin/shiny-server.sh"]
    packages.R
    View file @ d7198f3b
    ......@@ -6,12 +6,12 @@ install.packages("stringr")
    install.packages("curl")
    install.packages("httr")
    install.packages("xml2")
    #install.packages("aws.signature")
    #install.packages("aws.s3")
    install.packages("aws.signature")
    install.packages("aws.s3")
    #install.packages("BiocManager")
    #BiocManager::install("limma")
    #BiocManager::install("edgeR")
    #BiocManager::install("EBImage")
    install.packages("BiocManager")
    BiocManager::install("limma")
    BiocManager::install("edgeR")
    BiocManager::install("EBImage")
    #install.packages("/tmp/aws.s3-master/", repos=NULL)
    install.packages("/tmp/aws.s3-master/", repos=NULL)
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