From 49581d11955a67a73941f9a9a5267f8e819d36d3 Mon Sep 17 00:00:00 2001
From: Christopher Rhodes <christopher.rhodes@embl.de>
Date: Mon, 25 Mar 2024 17:05:31 +0100
Subject: [PATCH] Temporary error-handling for debug...
---
model_server/base/roiset.py | 15 ++++++++++-----
1 file changed, 10 insertions(+), 5 deletions(-)
diff --git a/model_server/base/roiset.py b/model_server/base/roiset.py
index 7cd327ae..33c30c12 100644
--- a/model_server/base/roiset.py
+++ b/model_server/base/roiset.py
@@ -290,11 +290,16 @@ class RoiSet(object):
# assign labels to object map:
for i, roi in enumerate(self):
- oc = np.unique(
- mask_largest_object(
- obmap_patches.iat(i).data
- )
- )[-1]
+ try:
+ oc = np.unique(
+ mask_largest_object(
+ obmap_patches.iat(i).data
+ )
+ )[-1]
+ except Exception as e:
+ print(i)
+ print(np.unique(mask_largest_object(obmap_patches.iat(i).data)))
+ raise e
self._df.loc[roi.Index, 'classify_by_' + name] = oc
om[self.acc_obj_ids.data == roi.label] = oc
self.object_class_maps[name] = InMemoryDataAccessor(om)
--
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