From e70bab4383d436377842eb5f6668554e93ee5748 Mon Sep 17 00:00:00 2001
From: Christopher Rhodes <christopher.rhodes@embl.de>
Date: Tue, 2 Apr 2024 15:18:29 +0200
Subject: [PATCH] RoiSet init can now access both 2d and 3d segmentations
---
tests/test_roiset.py | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/tests/test_roiset.py b/tests/test_roiset.py
index c68b5409..c39c64f8 100644
--- a/tests/test_roiset.py
+++ b/tests/test_roiset.py
@@ -25,7 +25,7 @@ class TestRoiSetMonoProducts(BaseTestRoiSetMonoProducts, unittest.TestCase):
def _make_roi_set(self, mask_type='boxes', **kwargs):
id_map = _get_label_ids(self.seg_mask)
- roiset = RoiSet.from_2d_obj_ids(
+ roiset = RoiSet(
self.stack_ch_pa,
id_map,
params=RoiSetMetaParams(
@@ -62,7 +62,7 @@ class TestRoiSetMonoProducts(BaseTestRoiSetMonoProducts, unittest.TestCase):
self.assertEqual(acc_zstack_slice.nz, 1)
id_map = _get_label_ids(self.seg_mask)
- roiset = RoiSet.from_2d_obj_ids(acc_zstack_slice, id_map, params=RoiSetMetaParams(mask_type='boxes'))
+ roiset = RoiSet(acc_zstack_slice, id_map, params=RoiSetMetaParams(mask_type='boxes'))
zmask = roiset.get_zmask()
zmask_acc = InMemoryDataAccessor(zmask)
--
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