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Robin Erich Muench
metaSNV
Commits
2c680073
Commit
2c680073
authored
Jan 20, 2017
by
Luis Pedro Coelho
Browse files
Improve documentation
parent
2e7c741e
Changes
1
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Side-by-side
src/snpCaller/call_vC.cpp
View file @
2c680073
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@@ -69,7 +69,11 @@ std::map<std::string,filePosition> mapGenes;
split_interval_map
<
long
,
GeneDef
>
geneIntervals
;
/**
* @brief Fast string tokanizer. (thread safe too)
* @brief Fast thread-safe string tokenizer.
*
* It ignores any spaces at the beginning of the string.
*
* Returns position after the token separator
*/
const
char
*
toksplit
(
const
char
*
src
,
/* Source of tokens */
char
tokchar
,
/* token delimiting char */
...
...
@@ -295,7 +299,7 @@ bool isPersonalSNP(std::map<char,long*>& map, int nrSamples, std::string snp) {
}
/**
* @brief
Guess what this function does!
* @brief
Return a reverse complemented copy of the input
*/
std
::
string
revComplement
(
std
::
string
codon
)
{
...
...
@@ -332,7 +336,7 @@ std::string getCoverageString(std::map<char,long*>& map, int nrSamples, std::str
}
/**
* @brief
This is where shit happens!
* @brief
Main function
*/
int
main
(
int
argc
,
char
**
argv
)
{
...
...
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