Commit e80d493e authored by Martin Schorb's avatar Martin Schorb
Browse files

update link to render-modules script dir

parent f779fa9a
......@@ -186,7 +186,7 @@ def n5export_execute_gobutton(click,jsonfile,launch_store):
log_file += '.log'
mkxml_p = launch_jobs.run(target='standalone',pyscript='rendermodules/materialize/make_xml.py',json = param_file,
mkxml_p = launch_jobs.run(target='standalone',pyscript=params.rendermodules_dir+'rendermodules/materialize/make_xml.py',json = param_file,
logfile=log_file,errfile=err_file)
......
......@@ -203,7 +203,7 @@ def sbem_conv_gobutton(stack_sel, in_dir, click, proj_dd_sel, compute_sel, run_s
#launch
# -----------------------
sbem_conv_p = launch_jobs.run(target=compute_sel,pyscript='$rendermodules/rendermodules/dataimport/generate_EM_tilespecs_from_SBEMImage.py',
sbem_conv_p = launch_jobs.run(target=compute_sel,pyscript=params.rendermodules_dir+'/rendermodules/dataimport/generate_EM_tilespecs_from_SBEMImage.py',
jsonfile=param_file,run_args=None,logfile=log_file,errfile=err_file)
run_state['status'] = 'running'
......
......@@ -193,7 +193,7 @@ def serialem_conv_gobutton(stack_sel, in_dir, click, proj_dd_sel, compute_sel, r
#launch
# -----------------------
sbem_conv_p = launch_jobs.run(target=compute_sel,pyscript='$rendermodules/rendermodules/dataimport/generate_EM_tilespecs_from_SerialEMmontage.py',
sbem_conv_p = launch_jobs.run(target=compute_sel,pyscript=params.rendermodules_dir+'/rendermodules/dataimport/generate_EM_tilespecs_from_SerialEMmontage.py',
jsonfile=param_file,run_args=None,logfile=log_file,errfile=err_file)
run_state['status'] = 'running'
......
......@@ -357,7 +357,7 @@ def mipmaps_gobutton(mipmapdir,click,click2,run_state,comp_sel,runstep_in,owner,
mipmap_generate_p = launch_jobs.run(target=comp_sel,pyscript='$rendermodules/rendermodules/dataimport/generate_mipmaps.py',
mipmap_generate_p = launch_jobs.run(target=comp_sel,pyscript=params.rendermodules_dir+'/rendermodules/dataimport/generate_mipmaps.py',
json=param_file,run_args=None,target_args=target_args,logfile=log_file,errfile=err_file)
......@@ -411,7 +411,7 @@ def mipmaps_gobutton(mipmapdir,click,click2,run_state,comp_sel,runstep_in,owner,
err_file = log_file + '.err'
log_file += '.log'
mipmap_apply_p = launch_jobs.run(target=comp_sel,pyscript='$rendermodules/rendermodules/dataimport/apply_mipmaps_to_render.py',
mipmap_apply_p = launch_jobs.run(target=comp_sel,pyscript=params.rendermodules_dir+'/rendermodules/dataimport/apply_mipmaps_to_render.py',
jsonfile=param_file,run_args=None,logfile=log_file,errfile=err_file)
launch_store=dict()
......
......@@ -264,7 +264,7 @@ def sift_pointmatch_execute_gobutton(click,matchID,matchcoll,comp_sel,mc_owner,t
target_args = None
run_args = None
script = '$rendermodules/rendermodules/pointmatch/generate_point_matches_opencv.py'
script = params.rendermodules_dir+'/rendermodules/pointmatch/generate_point_matches_opencv.py'
elif comp_sel == 'sparkslurm':
spsl_p = dict()
......
......@@ -323,7 +323,7 @@ def solve_execute_gobutton(click,matchcoll,outstack,tform,stype,comp_sel,startse
# time.sleep(5)
solve_generate_p = launch_jobs.run(target=comp_sel,pyscript='$rendermodules/rendermodules/solver/solve.py',
solve_generate_p = launch_jobs.run(target=comp_sel,pyscript=params.rendermodules_dir+'/rendermodules/solver/solve.py',
jsonfile=param_file,run_args=None,target_args=None,logfile=log_file,errfile=err_file)
time.sleep(5)
......
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