regex-introduction issueshttps://git.embl.de/stamper/regex-introduction/-/issues2017-10-06T05:14:31Zhttps://git.embl.de/stamper/regex-introduction/-/issues/7create protein sequence file2017-10-06T05:14:31ZToby Hodgescreate protein sequence fileusing cyclin docking motif
[RK].L.{0,1}[FYLIVMP]
& create seq logo at weblogs.berkeley.eduusing cyclin docking motif
[RK].L.{0,1}[FYLIVMP]
& create seq logo at weblogs.berkeley.eduComplete materials for March 2017 courseToby HodgesToby Hodgeshttps://git.embl.de/stamper/regex-introduction/-/issues/6Create sequence logo image for exercise2017-10-06T05:14:31ZToby HodgesCreate sequence logo image for exerciseComplete materials for March 2017 courseToby HodgesToby Hodgeshttps://git.embl.de/stamper/regex-introduction/-/issues/5Create fake FASTQ file for exercises2017-10-06T05:14:31ZToby HodgesCreate fake FASTQ file for exercisesComplete materials for March 2017 courseToby HodgesToby Hodgeshttps://git.embl.de/stamper/regex-introduction/-/issues/4Create fake address file for exercises2017-10-06T05:14:31ZToby HodgesCreate fake address file for exercisesComplete materials for March 2017 courseMarkus Hsi-Yang FritzMarkus Hsi-Yang Fritzhttps://git.embl.de/stamper/regex-introduction/-/issues/3Add exercises2017-10-06T05:14:31ZToby HodgesAdd exercisesMake sure that all exercises exist and have solutionsMake sure that all exercises exist and have solutionsComplete materials for March 2017 coursehttps://git.embl.de/stamper/regex-introduction/-/issues/2Cheat sheet2017-10-06T05:14:31ZToby HodgesCheat sheetFind/complete a cheat sheet for printing before the courseFind/complete a cheat sheet for printing before the courseComplete materials for March 2017 courseToby HodgesToby Hodgeshttps://git.embl.de/stamper/regex-introduction/-/issues/11add section on escaping2017-10-06T05:14:31ZToby Hodgesadd section on escapingadd section to cheat sheet on backslash-escaping special charactersadd section to cheat sheet on backslash-escaping special charactersCourse v2https://git.embl.de/stamper/regex-introduction/-/issues/10move course repo to grp-bio-it namespace2017-10-06T05:14:31ZToby Hodgesmove course repo to grp-bio-it namespaceCourse v2https://git.embl.de/stamper/regex-introduction/-/issues/9add usage examples to cheat sheet2017-10-06T05:14:31ZToby Hodgesadd usage examples to cheat sheetadd section to cheat sheet, with examples of how to use regexes in several common programming languages - perl one-liners, python re module, R, sed, grep, etc...add section to cheat sheet, with examples of how to use regexes in several common programming languages - perl one-liners, python re module, R, sed, grep, etc...Course v2https://git.embl.de/stamper/regex-introduction/-/issues/8add sequence logo exercise2017-10-06T05:14:31ZToby Hodgesadd sequence logo exerciseadd an exercise to chapter 3, after introduction of `.` wildcard, using the sequence logo PNG in `images/`.add an exercise to chapter 3, after introduction of `.` wildcard, using the sequence logo PNG in `images/`.Course v2https://git.embl.de/stamper/regex-introduction/-/issues/1Building / hosting project2017-10-06T05:14:31ZMarkus Hsi-Yang FritzBuilding / hosting projectHey there,
I have pushed a branch [`build`](https://git.embl.de/stamper/regex-introduction/tree/build) which contains a static website and a PDF, both generated with [`gitbook`](https://toolchain.gitbook.com/). This branch is not mean...Hey there,
I have pushed a branch [`build`](https://git.embl.de/stamper/regex-introduction/tree/build) which contains a static website and a PDF, both generated with [`gitbook`](https://toolchain.gitbook.com/). This branch is not meant for merging (as it contains the built assets) but should simply kick off some discussion.
For viewing the website, navigate to the `_book` directory and start a(ny) web server, e.g. `python -mSimpleHTTPServer`. This directory also contains the PDF: `book.pdf`.
I think the website looks great out of the box, the PDF probably needs some tweaking, or we just use a separate tool (e.g. [`pandoc`](http://pandoc.org/)).
Another open question will be whether we want a self-compiled / self-hosted version at all or simply push the stuff to https://www.gitbook.com.